DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pink1 and Pink1

DIOPT Version :10

Sequence 1:NP_572340.2 Gene:Pink1 / 31607 FlyBaseID:FBgn0029891 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001425048.1 Gene:Pink1 / 298575 RGDID:1305769 Length:580 Species:Rattus norvegicus


Alignment Length:594 Identity:189/594 - (31%)
Similarity:268/594 - (45%) Gaps:132/594 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 GDSAPFFALIGVSLASGSGVLSKEDELEGVCWEIREAASRLQN-----AWNHDEISDTLDSK--- 188
            |.:.|....:.::...|.|::.::..      |.|.|||..|.     ...:.::||.||::   
  Rat    91 GGAGPCGRAVFLAFGLGLGLIEEKQA------ESRRAASACQEIQAIFTQKNKQVSDPLDTRRWQ 149

  Fly   189 -FTIDDLEIGPPIAKGCAAVVYAADFKKDVASDGASLHTDAQPQATPAFAPNSWSTHEMMSPLQN 252
             |.::|..||..|.|||.|.||                     :||....|            |:
  Rat   150 GFRLEDYLIGQAIGKGCNAAVY---------------------EATMPTLP------------QH 181

  Fly   253 MSRFVH--NFGGSVDNVFHYSQPSAASDFVGAQSREQDQRHHEQQQHQNQEQEQHQNQEPSSSAF 315
            :.:..|  ..|...|.|      |..:|                           ..|.|.:.||
  Rat   182 LEKAKHLGLLGKGPDVV------SKGAD---------------------------GEQAPGAPAF 213

  Fly   316 NVTSPANSNINSSVDSYPLALKMMFNYDIQSNALSILRAMYKETVPARQRGMN-EAADEWERLLQ 379
                             |.|:|||:|....|::.:||..|.:|.|||.:..:: |......|..:
  Rat   214 -----------------PFAIKMMWNISAGSSSEAILSKMSQELVPASRMALDGEYGAVTYRRSR 261

  Fly   380 NQTVHLPRHPNIVCMFGFFCDEVRNFPDGHLLYPVAQPQRINPQGYGRNMSLYLLMKRYDHSLRG 444
            :....|..||||:.:|..|...|...|.....||...|....|:|.|...:|:|:||.|..:||.
  Rat   262 DGPKQLAPHPNIIRVFRAFTSSVPLLPGALADYPDMLPPHYYPEGLGHGRTLFLVMKNYPCTLRQ 326

  Fly   445 LLDSQDLSTRNRILLLAQMLEAVNHLSRHGVAHRDLKSDNVLIELQDDAAPVLVLSDFGCCLADK 509
            .|:.|..|:|...::..|:||.|:||.:.|:|||||||||:|:|...|..|.||:|||||||||:
  Rat   327 YLEEQTPSSRLATMMTLQLLEGVDHLVQQGIAHRDLKSDNILVEWDSDGCPWLVISDFGCCLADE 391

  Fly   510 VHGLRLPYVSHDVDKGGNAALMAPEIFNTMPGPFAVLNYGKADLWACGALAYEIFGNRNPFYSSS 574
            ..||:||:.|..|::|||.:|||||:.....||.||::|.|||.||.||:||||||..||||   
  Rat   392 RVGLQLPFNSSSVERGGNGSLMAPEVSTAHSGPHAVIDYSKADTWAVGAIAYEIFGLANPFY--- 453

  Fly   575 GGMARERGEMTLSLRNSDYRQDQLPPMSDACPPLLQQLVYNILNPNPSKRVSPDIAANVVQLFLW 639
                   |:.:..|.:..|::.|||.|..:.||..:|||.::|....:||.|..|||||:.|.||
  Rat   454 -------GQGSAHLESRSYQEAQLPEMPKSVPPETRQLVRSLLQREANKRPSARIAANVLHLSLW 511

  Fly   640 -----APSNWLKAGGMPNSPEILQWLLSLTTKIMCEGRPQMGAGLMPVASCGNRRAYVEYL--LI 697
                 |..| ||...|      :.|||..:...:...|       :...||...:..:.:|  |.
  Rat   512 GEHLLALKN-LKLDKM------IAWLLQQSAATLLADR-------LREKSCVETKLQMLFLANLE 562

  Fly   698 CSFLARARL 706
            |..|.:|.|
  Rat   563 CEALCQAAL 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pink1NP_572340.2 STKc_PINK1 328..639 CDD:270920 131/311 (42%)
Pink1NP_001425048.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..60
Required for outer membrane localization. /evidence=ECO:0000250|UniProtKB:Q9BXM7 111..117 0/5 (0%)
Blue background indicates that the domain is not in the aligned region.

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