DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fum2 and FUM1

DIOPT Version :9

Sequence 1:NP_727109.2 Gene:Fum2 / 31606 FlyBaseID:FBgn0029890 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_015061.1 Gene:FUM1 / 855866 SGDID:S000006183 Length:488 Species:Saccharomyces cerevisiae


Alignment Length:490 Identity:293/490 - (59%)
Similarity:370/490 - (75%) Gaps:11/490 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LRAKDCD------SGGKGGKGKENGKFRTEKDTFGELKVPADKLYGAQTMRSKLNFPIGDIGERM 80
            ||..:|.      |..|....:.|..||||.|.|||:.|||||.:||||.||..||.||...|||
Yeast     2 LRFTNCSCKTFVKSSYKLNIRRMNSSFRTETDAFGEIHVPADKYWGAQTQRSFQNFKIGGARERM 66

  Fly    81 PMPVIQAMGILKKACAEVNKDY-GLDGKVSDAVSCACDDVISGKLYKQGHFPLVIWQTGSGTQTN 144
            |:|::.|.|:|||:.|.||:.. |||.|:|.|:..|.|:|.||||  ..|||||::|||||||:|
Yeast    67 PLPLVHAFGVLKKSAAIVNESLGGLDPKISKAIQQAADEVASGKL--DDHFPLVVFQTGSGTQSN 129

  Fly   145 MNTNEVISNAAIKMMGGELGSKKPVHPNDHVNKSQSSNDTFPTAIHISVGMELNERLVPAVTHLR 209
            ||.||||||.||:::||::|||: ||||:|.|:||||||||||.:||:..:::...|:|.:|:|:
Yeast   130 MNANEVISNRAIEILGGKIGSKQ-VHPNNHCNQSQSSNDTFPTVMHIAASLQIQNELIPELTNLK 193

  Fly   210 DALKSKSDEFKDIIKIGRTHLMDAVPLTLGQEFSGYTQQLTNGLERIKGCLPRVYELALGGTAVG 274
            :||::||.||..|:|||||||.||.|||||||||||.||:.||::|:...|..:..||.||||||
Yeast   194 NALEAKSKEFDHIVKIGRTHLQDATPLTLGQEFSGYVQQVENGIQRVAHSLKTLSFLAQGGTAVG 258

  Fly   275 TGLNTRKGFAEKVAKRISELTCLPFVSAPNKFEALAARDAMVEVHGVLNTIAVSLMKIANDIRLL 339
            |||||:.||..|:|::||:.|.|.|.:||||||||||.||:||..|.|||:|.||.|||.|||.|
Yeast   259 TGLNTKPGFDVKIAEQISKETGLKFQTAPNKFEALAAHDAIVECSGALNTLACSLFKIAQDIRYL 323

  Fly   340 GSGPRCGLGELMLPENEPGSSIMPGKVNPTQCESMTMLCAQVMGNQVAVTIGGSNGHFELNVFKP 404
            |||||||..||||||||||||||||||||||.|::|.:|.|||||..|:|..||.|.||||||||
Yeast   324 GSGPRCGYHELMLPENEPGSSIMPGKVNPTQNEALTQVCVQVMGNNAAITFAGSQGQFELNVFKP 388

  Fly   405 LVVSNVLRSIRLLADGSMTFSKNCVEGLQANKERIDKIMNESLMLVTALNPHIGYDKAALIAKTA 469
            ::::|:|.||||:.|.:.:|..:||||::||:.||.:::.:||||||||||.||||.|:.:||.|
Yeast   389 VMIANLLNSIRLITDAAYSFRVHCVEGIKANEPRIHELLTKSLMLVTALNPKIGYDAASKVAKNA 453

  Fly   470 HKNKTTLKEEALKTGI-TEEQFKEWVNPKEMLGPK 503
            ||...||||.||:.|: ||::|.|||.|:.|||||
Yeast   454 HKKGITLKESALELGVLTEKEFDEWVVPEHMLGPK 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fum2NP_727109.2 fumC 42..503 CDD:234779 285/462 (62%)
Fumarase_classII 43..499 CDD:176465 281/457 (61%)
FUM1NP_015061.1 fumC 26..488 CDD:234779 285/464 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346588
Domainoid 1 1.000 427 1.000 Domainoid score I71
eggNOG 1 0.900 - - E1_COG0114
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 590 1.000 Inparanoid score I138
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61095
OrthoFinder 1 1.000 - - FOG0002459
OrthoInspector 1 1.000 - - otm46567
orthoMCL 1 0.900 - - OOG6_101016
Panther 1 1.100 - - O PTHR11444
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1641
TreeFam 1 0.960 - -
1312.760

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