DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fum2 and fum1

DIOPT Version :9

Sequence 1:NP_727109.2 Gene:Fum2 / 31606 FlyBaseID:FBgn0029890 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_588397.3 Gene:fum1 / 2539345 PomBaseID:SPCC18.18c Length:520 Species:Schizosaccharomyces pombe


Alignment Length:473 Identity:296/473 - (62%)
Similarity:372/473 - (78%) Gaps:6/473 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KGGKGKENGKFRTEKDTFGELKVPADKLYGAQTMRSKLNFPIGDIGERMPMPVIQAMGILKKACA 96
            ||||   :|:||.|.||||.::|||:|.:||||.||..||.||...||:|:|:::|.|:||:|.|
pombe    51 KGGK---HGEFRQESDTFGPIQVPAEKYWGAQTQRSLQNFRIGGEKERLPLPLVRAFGVLKRAAA 112

  Fly    97 EVNKDYGLDGKVSDAVSCACDDVISGKLYKQGHFPLVIWQTGSGTQTNMNTNEVISNAAIKMMGG 161
            .||:::|||.|::||:..|..:||.|:|  ..:||||::|||||||:|||:||||:|.||:::||
pombe   113 SVNREFGLDPKLADAIEQAAQEVIDGRL--DDNFPLVVFQTGSGTQSNMNSNEVIANRAIEILGG 175

  Fly   162 ELGSKKPVHPNDHVNKSQSSNDTFPTAIHISVGMELNERLVPAVTHLRDALKSKSDEFKDIIKIG 226
            .||||||||||||||.||||||||||.:||:..::::..|:||:.||..|||.|.:|||:|||||
pombe   176 TLGSKKPVHPNDHVNMSQSSNDTFPTVMHIASVLQIHTHLLPAMKHLHRALKGKEEEFKNIIKIG 240

  Fly   227 RTHLMDAVPLTLGQEFSGYTQQLTNGLERIKGCLPRVYELALGGTAVGTGLNTRKGFAEKVAKRI 291
            |||:.||.||:||||||||..|:..|:|||...|||:..||.|||||||||||.:||..|||:::
pombe   241 RTHMQDATPLSLGQEFSGYVTQVGYGIERINNALPRLCLLAQGGTAVGTGLNTFEGFDVKVAEKV 305

  Fly   292 SELTCLPFVSAPNKFEALAARDAMVEVHGVLNTIAVSLMKIANDIRLLGSGPRCGLGELMLPENE 356
            |:||.:.|.:||||||||||.||:||:.|.||.||.||||||||||.||||||||||||:||.||
pombe   306 SKLTNIEFKTAPNKFEALAAHDAIVEMSGALNVIACSLMKIANDIRQLGSGPRCGLGELILPANE 370

  Fly   357 PGSSIMPGKVNPTQCESMTMLCAQVMGNQVAVTIGGSNGHFELNVFKPLVVSNVLRSIRLLADGS 421
            ||||||||||||||||::||:|||||||...:|:.|::||.||||||||:..|:|.|||||.|..
pombe   371 PGSSIMPGKVNPTQCEALTMVCAQVMGNHATITVAGASGHCELNVFKPLLAKNILSSIRLLGDAC 435

  Fly   422 MTFSKNCVEGLQANKERIDKIMNESLMLVTALNPHIGYDKAALIAKTAHKNKTTLKEEALKTGI- 485
            .:|:.:||.|::.|.|.|.:.:.:|||||||||||||||..|.|||||.|||:|||.|.:..|. 
pombe   436 ESFTDHCVVGIEPNYEGIARHLRDSLMLVTALNPHIGYDNCAKIAKTALKNKSTLKHEFVTLGFG 500

  Fly   486 TEEQFKEWVNPKEMLGPK 503
            |.|||.|||.|:.|:..|
pombe   501 TPEQFDEWVRPELMISAK 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fum2NP_727109.2 fumC 42..503 CDD:234779 290/461 (63%)
Fumarase_classII 43..499 CDD:176465 288/456 (63%)
fum1NP_588397.3 fumC 57..519 CDD:234779 291/464 (63%)
Fumarase_classII 59..514 CDD:176465 288/456 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 457 1.000 Domainoid score I65
eggNOG 1 0.900 - - E1_COG0114
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 619 1.000 Inparanoid score I150
OMA 1 1.010 - - QHG61095
OrthoFinder 1 1.000 - - FOG0002459
OrthoInspector 1 1.000 - - otm47041
orthoMCL 1 0.900 - - OOG6_101016
Panther 1 1.100 - - O PTHR11444
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1641
TreeFam 1 0.960 - -
1211.830

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