DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fum2 and fum-1

DIOPT Version :9

Sequence 1:NP_727109.2 Gene:Fum2 / 31606 FlyBaseID:FBgn0029890 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_498642.1 Gene:fum-1 / 176059 WormBaseID:WBGene00001503 Length:501 Species:Caenorhabditis elegans


Alignment Length:464 Identity:343/464 - (73%)
Similarity:395/464 - (85%) Gaps:3/464 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KFRTEKDTFGELKVPADKLYGAQTMRSKLNFPIGDIGERMPMPVIQAMGILKKACAEVNKDYGLD 105
            |.|.|:||||||:|||||.|||||.||::||.||...||||:|||.|.||||||.|.||.::|||
 Worm    40 KIRKERDTFGELEVPADKYYGAQTARSQMNFKIGGPEERMPIPVIHAFGILKKAAALVNTEFGLD 104

  Fly   106 GKVSDAVSCACDDVISGKLYKQGHFPLVIWQTGSGTQTNMNTNEVISNAAIKMMGGELGSKKPVH 170
            .|::||:|.|.|:|:.|||  ..|||||.||||||||:|||.||||||.||:::|||||||||||
 Worm   105 KKLADAISQAADEVVDGKL--DEHFPLVTWQTGSGTQSNMNVNEVISNRAIEILGGELGSKKPVH 167

  Fly   171 PNDHVNKSQSSNDTFPTAIHISVGMELNERLVPAVTHLRDALKSKSDEFKDIIKIGRTHLMDAVP 235
            ||||||.|||||||||||:||:||.|:|.||:||:..||.||.:|::||||||||||||..||||
 Worm   168 PNDHVNMSQSSNDTFPTAMHIAVGREVNSRLLPALKKLRTALHNKAEEFKDIIKIGRTHTQDAVP 232

  Fly   236 LTLGQEFSGYTQQLTNGLERIKGCLPRVYELALGGTAVGTGLNTRKGFAEKVAKRISELTCLPFV 300
            ||||||||.|..||.|.:.|::..|||:|:||.||||||||||||||||||||..:||||.||||
 Worm   233 LTLGQEFSAYVTQLDNSIARVESTLPRLYQLAAGGTAVGTGLNTRKGFAEKVAATVSELTGLPFV 297

  Fly   301 SAPNKFEALAARDAMVEVHGVLNTIAVSLMKIANDIRLLGSGPRCGLGELMLPENEPGSSIMPGK 365
            :||||||||||.||:|||||.|||:|||.|||.||||.||||||||||||.||||||||||||||
 Worm   298 TAPNKFEALAAHDALVEVHGALNTVAVSFMKIGNDIRFLGSGPRCGLGELSLPENEPGSSIMPGK 362

  Fly   366 VNPTQCESMTMLCAQVMGNQVAVTIGGSNGHFELNVFKPLVVSNVLRSIRLLADGSMTFSKNCVE 430
            |||||||::||:.||||||||||::|||||||||||||||:|.|||:|.|||||.:::|:.:||:
 Worm   363 VNPTQCEAITMVAAQVMGNQVAVSVGGSNGHFELNVFKPLIVRNVLQSTRLLADSAVSFTDHCVD 427

  Fly   431 GLQANKERIDKIMNESLMLVTALNPHIGYDKAALIAKTAHKNKTTLKEEALKTGI-TEEQFKEWV 494
            |:.|||:.|.|||.||||||||||||||||.||.||||||||.|||.:||:|.|| |||||.:||
 Worm   428 GIVANKDNIAKIMRESLMLVTALNPHIGYDNAAKIAKTAHKNGTTLVQEAVKLGILTEEQFAQWV 492

  Fly   495 NPKEMLGPK 503
            .|:.|||||
 Worm   493 KPENMLGPK 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fum2NP_727109.2 fumC 42..503 CDD:234779 340/461 (74%)
Fumarase_classII 43..499 CDD:176465 337/456 (74%)
fum-1NP_498642.1 fumC 38..501 CDD:234779 341/462 (74%)
Fumarase_classII 42..497 CDD:176465 337/456 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167430
Domainoid 1 1.000 522 1.000 Domainoid score I148
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 722 1.000 Inparanoid score I327
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61095
OrthoDB 1 1.010 - - D1022919at2759
OrthoFinder 1 1.000 - - FOG0002459
OrthoInspector 1 1.000 - - otm14286
orthoMCL 1 0.900 - - OOG6_101016
Panther 1 1.100 - - O PTHR11444
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1641
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.910

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