DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fum1 and FUM2

DIOPT Version :9

Sequence 1:NP_572339.1 Gene:Fum1 / 31605 FlyBaseID:FBgn0286222 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_851166.1 Gene:FUM2 / 835168 AraportID:AT5G50950 Length:510 Species:Arabidopsis thaliana


Alignment Length:456 Identity:314/456 - (68%)
Similarity:363/456 - (79%) Gaps:5/456 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RLASQEFRVESDTFGELKVPADKYYGAQTMRSQINFPIGGATERMPKPVVQAMGILKKAAAEVNK 92
            |..|..||.|.||||.::||:||.:||||.||..||.|||..||||:|:|:|.|:|||.||:||.
plant    33 RSYSTPFREERDTFGPIQVPSDKLWGAQTQRSLQNFEIGGDRERMPEPIVRAFGVLKKCAAKVNM 97

  Fly    93 EFGLDSKVSEAISKAADDVISGKLYDDHFPLVIWQTGSGTQSNMNVNEVISNRAIELLGGKLGSK 157
            |:|||..:.|||.:||.:|..||| :||||||:||||||||||||.||||:|||.|:||.|.|.|
plant    98 EYGLDPMIGEAIMEAAQEVAEGKL-NDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK 161

  Fly   158 TPVHPNDHVNKSQSSNDTFPTAIHISVALELNNNLKPAIKTLHDALRAKSEEFKDIIKIGRTHTM 222
            . ||||||||:||||||||||.:||:.|.|:.:.|.|::|.||.:|.:||.|||||:|||||||.
plant   162 I-VHPNDHVNRSQSSNDTFPTVMHIAAATEITSRLIPSLKNLHSSLESKSFEFKDIVKIGRTHTQ 225

  Fly   223 DAVPLTLGQEFSGYAQQLAYAQERIDACLPRVYELALGGTAVGTGLNTRKGFAEKCAAKIAELTS 287
            ||.||||||||.|||.|:.|...|:...|||:|:||.|||||||||||:|||..|.||.:||.|:
plant   226 DATPLTLGQEFGGYATQVEYGLNRVACTLPRIYQLAQGGTAVGTGLNTKKGFDVKIAAAVAEETN 290

  Fly   288 LPFVTAPNKFEALAARDAMVEVHGVLNTIAVSLMKIANDIRFLGSGPRCGLGELSLPENEPGSSI 352
            ||||||.||||||||.||.||..|.|||||.||||||||||||||||||||||||||||||||||
plant   291 LPFVTAENKFEALAAHDACVETSGSLNTIATSLMKIANDIRFLGSGPRCGLGELSLPENEPGSSI 355

  Fly   353 MPGKVNPTQCESLTMLSAQVMGNQVAVTIGGSNGHFELNVFKPLIVSNVLRSIRLLSDGSRTFTA 417
            |||||||||||:|||:.||||||.|||||||||||||||||||:|.|.:|.||||::|.|.:|..
plant   356 MPGKVNPTQCEALTMVCAQVMGNHVAVTIGGSNGHFELNVFKPVIASALLHSIRLIADASASFEK 420

  Fly   418 NCVNGIQANRENIAKIMNESLMLVTALNPHIGYDKAAKIAKTAHKNGTTLKEEAINLGYLTEQQF 482
            |||.||:||||.|:|:::|||||||:|||.||||.||.:||.|||.|.|||   :|...||....
plant   421 NCVRGIEANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKRAHKEGCTLK---VNNKLLTFSSL 482

  Fly   483 N 483
            |
plant   483 N 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fum1NP_572339.1 fumC 31..495 CDD:234779 313/453 (69%)
FUM2NP_851166.1 Fumarase_classII 40..471 CDD:176465 305/432 (71%)
PLN00134 46..503 CDD:215069 307/443 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 468 1.000 Domainoid score I90
eggNOG 1 0.900 - - E1_COG0114
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H115
Inparanoid 1 1.050 648 1.000 Inparanoid score I173
OMA 1 1.010 - - QHG61095
OrthoDB 1 1.010 - - D1022919at2759
OrthoFinder 1 1.000 - - FOG0002459
OrthoInspector 1 1.000 - - mtm1198
orthoMCL 1 0.900 - - OOG6_101016
Panther 1 1.100 - - O PTHR11444
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1641
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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