DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fum1 and fum1

DIOPT Version :9

Sequence 1:NP_572339.1 Gene:Fum1 / 31605 FlyBaseID:FBgn0286222 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_588397.3 Gene:fum1 / 2539345 PomBaseID:SPCC18.18c Length:520 Species:Schizosaccharomyces pombe


Alignment Length:463 Identity:311/463 - (67%)
Similarity:374/463 - (80%) Gaps:1/463 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 EFRVESDTFGELKVPADKYYGAQTMRSQINFPIGGATERMPKPVVQAMGILKKAAAEVNKEFGLD 97
            |||.||||||.::|||:||:||||.||..||.|||..||:|.|:|:|.|:||:|||.||:|||||
pombe    57 EFRQESDTFGPIQVPAEKYWGAQTQRSLQNFRIGGEKERLPLPLVRAFGVLKRAAASVNREFGLD 121

  Fly    98 SKVSEAISKAADDVISGKLYDDHFPLVIWQTGSGTQSNMNVNEVISNRAIELLGGKLGSKTPVHP 162
            .|:::||.:||.:||.|:| ||:||||::|||||||||||.||||:|||||:|||.||||.||||
pombe   122 PKLADAIEQAAQEVIDGRL-DDNFPLVVFQTGSGTQSNMNSNEVIANRAIEILGGTLGSKKPVHP 185

  Fly   163 NDHVNKSQSSNDTFPTAIHISVALELNNNLKPAIKTLHDALRAKSEEFKDIIKIGRTHTMDAVPL 227
            |||||.||||||||||.:||:..|:::.:|.||:|.||.||:.|.||||:||||||||..||.||
pombe   186 NDHVNMSQSSNDTFPTVMHIASVLQIHTHLLPAMKHLHRALKGKEEEFKNIIKIGRTHMQDATPL 250

  Fly   228 TLGQEFSGYAQQLAYAQERIDACLPRVYELALGGTAVGTGLNTRKGFAEKCAAKIAELTSLPFVT 292
            :||||||||..|:.|..|||:..|||:..||.|||||||||||.:||..|.|.|:::||::.|.|
pombe   251 SLGQEFSGYVTQVGYGIERINNALPRLCLLAQGGTAVGTGLNTFEGFDVKVAEKVSKLTNIEFKT 315

  Fly   293 APNKFEALAARDAMVEVHGVLNTIAVSLMKIANDIRFLGSGPRCGLGELSLPENEPGSSIMPGKV 357
            ||||||||||.||:||:.|.||.||.||||||||||.||||||||||||.||.||||||||||||
pombe   316 APNKFEALAAHDAIVEMSGALNVIACSLMKIANDIRQLGSGPRCGLGELILPANEPGSSIMPGKV 380

  Fly   358 NPTQCESLTMLSAQVMGNQVAVTIGGSNGHFELNVFKPLIVSNVLRSIRLLSDGSRTFTANCVNG 422
            ||||||:|||:.||||||...:|:.|::||.||||||||:..|:|.|||||.|...:||.:||.|
pombe   381 NPTQCEALTMVCAQVMGNHATITVAGASGHCELNVFKPLLAKNILSSIRLLGDACESFTDHCVVG 445

  Fly   423 IQANRENIAKIMNESLMLVTALNPHIGYDKAAKIAKTAHKNGTTLKEEAINLGYLTEQQFNDWVR 487
            |:.|.|.||:.:.:|||||||||||||||..|||||||.||.:|||.|.:.||:.|.:||::|||
pombe   446 IEPNYEGIARHLRDSLMLVTALNPHIGYDNCAKIAKTALKNKSTLKHEFVTLGFGTPEQFDEWVR 510

  Fly   488 PEQMLGPK 495
            ||.|:..|
pombe   511 PELMISAK 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fum1NP_572339.1 fumC 31..495 CDD:234779 310/461 (67%)
fum1NP_588397.3 fumC 57..519 CDD:234779 311/463 (67%)
Fumarase_classII 59..514 CDD:176465 307/455 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 457 1.000 Domainoid score I65
eggNOG 1 0.900 - - E1_COG0114
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H115
Inparanoid 1 1.050 619 1.000 Inparanoid score I150
OMA 1 1.010 - - QHG61095
OrthoFinder 1 1.000 - - FOG0002459
OrthoInspector 1 1.000 - - otm47041
orthoMCL 1 0.900 - - OOG6_101016
Panther 1 1.100 - - LDO PTHR11444
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R461
SonicParanoid 1 1.000 - - X1641
TreeFam 1 0.960 - -
1413.860

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