DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fum1 and Fh

DIOPT Version :9

Sequence 1:NP_572339.1 Gene:Fum1 / 31605 FlyBaseID:FBgn0286222 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_058701.2 Gene:Fh / 24368 RGDID:2614 Length:507 Species:Rattus norvegicus


Alignment Length:479 Identity:366/479 - (76%)
Similarity:415/479 - (86%) Gaps:2/479 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TKPWAAIGSLRLASQ-EFRVESDTFGELKVPADKYYGAQTMRSQINFPIGGATERMPKPVVQAMG 81
            |.|..|...:|:||| .||:|.|||||||||.||||||||:||.:||.|||||||||.||::|.|
  Rat    30 TLPRCAPNVVRMASQNSFRIEYDTFGELKVPTDKYYGAQTVRSTMNFKIGGATERMPIPVIKAFG 94

  Fly    82 ILKKAAAEVNKEFGLDSKVSEAISKAADDVISGKLYDDHFPLVIWQTGSGTQSNMNVNEVISNRA 146
            |||:||||||:|:|||.|::.||.||||:|..||| :||||||:||||||||:||||||||||||
  Rat    95 ILKRAAAEVNQEYGLDPKIASAIMKAADEVAEGKL-NDHFPLVVWQTGSGTQTNMNVNEVISNRA 158

  Fly   147 IELLGGKLGSKTPVHPNDHVNKSQSSNDTFPTAIHISVALELNNNLKPAIKTLHDALRAKSEEFK 211
            ||:|||:||||.|||||||||||||||||||||:||:.|||::..|.|.::.|||||.|||:||.
  Rat   159 IEMLGGELGSKKPVHPNDHVNKSQSSNDTFPTAMHIAAALEVHQVLLPGLQKLHDALSAKSKEFA 223

  Fly   212 DIIKIGRTHTMDAVPLTLGQEFSGYAQQLAYAQERIDACLPRVYELALGGTAVGTGLNTRKGFAE 276
            .:||||||||.||||||||||||||.||:.||.|||.|.:||:||||.||||||||||||.||||
  Rat   224 QVIKIGRTHTQDAVPLTLGQEFSGYVQQVQYAMERIKAAMPRIYELAAGGTAVGTGLNTRIGFAE 288

  Fly   277 KCAAKIAELTSLPFVTAPNKFEALAARDAMVEVHGVLNTIAVSLMKIANDIRFLGSGPRCGLGEL 341
            |.|||:|.||.|||||||||||||||.||:||:.|.:||.|.|||||||||||||||||.|||||
  Rat   289 KVAAKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGEL 353

  Fly   342 SLPENEPGSSIMPGKVNPTQCESLTMLSAQVMGNQVAVTIGGSNGHFELNVFKPLIVSNVLRSIR 406
            .|||||||||||||||||||||::||::||||||.||||:||||||||||||||:::.|||.|.|
  Rat   354 ILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSAR 418

  Fly   407 LLSDGSRTFTANCVNGIQANRENIAKIMNESLMLVTALNPHIGYDKAAKIAKTAHKNGTTLKEEA 471
            ||.|.|.:||.|||.|||||.|.|.|:|||||||||||||||||||||||||||||||:||||.|
  Rat   419 LLGDASVSFTENCVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKETA 483

  Fly   472 INLGYLTEQQFNDWVRPEQMLGPK 495
            |.|||||.:||::||:|:.|||||
  Rat   484 IELGYLTAEQFDEWVKPKDMLGPK 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fum1NP_572339.1 fumC 31..495 CDD:234779 359/464 (77%)
FhNP_058701.2 fumC 46..507 CDD:234779 357/461 (77%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P05042 142..144 1/1 (100%)
Substrate binding (B site). /evidence=ECO:0000250|UniProtKB:P05042 173..176 2/2 (100%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P05042 183..185 1/1 (100%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P9WN93 368..370 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353978
Domainoid 1 1.000 525 1.000 Domainoid score I284
eggNOG 1 0.900 - - E1_COG0114
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H115
Inparanoid 1 1.050 734 1.000 Inparanoid score I577
OMA 1 1.010 - - QHG61095
OrthoDB 1 1.010 - - D1022919at2759
OrthoFinder 1 1.000 - - FOG0002459
OrthoInspector 1 1.000 - - otm44667
orthoMCL 1 0.900 - - OOG6_101016
Panther 1 1.100 - - LDO PTHR11444
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1641
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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