DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm6 and MCM3

DIOPT Version :9

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_010882.1 Gene:MCM3 / 856680 SGDID:S000000758 Length:971 Species:Saccharomyces cerevisiae


Alignment Length:798 Identity:236/798 - (29%)
Similarity:350/798 - (43%) Gaps:218/798 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GIRAQKLFQDFLEEF-----------------------------------KEDG-EIKYTRPAAS 46
            |.|.:: ||:||:.|                                   .:|| :::..:.|||
Yeast    22 GDRVRR-FQEFLDTFTSYRDSVRSIQVYNSNNAANYNDDQDDADERDLLGDDDGDDLEKEKKAAS 85

  Fly    47 LES----PDRCTLEVSFEDVEKYDQNLATAI-IEEYYHIYPFLCQSVSNYVKDRIGLKTQKDCYV 106
            ..|    |.|  :.:|.:|:.::|::..:.| :|..|.|.|              ..|...|...
Yeast    86 STSLNILPHR--IIISLDDLREFDRSFWSGILVEPAYFIPP--------------AEKALTDLAD 134

  Fly   107 AFTEVP--------TRH---------------KVRDLTTSKIGTLIRISGQVVRTHPVHPELVSG 148
            :..:||        :||               ..|.||...:..|:.:.|.|.:|..|.|:|:..
Yeast   135 SMDDVPHPNASAVSSRHPWKLSFKGSFGAHALSPRTLTAQHLNKLVSVEGIVTKTSLVRPKLIRS 199

  Fly   149 VFMC-----------LDCQTEIRNVEQQFKFTNPTICRNPVCSNRKRFMLDVEKSLFLDFQKIRI 202
            |...           .|..|.:..     :...|.|.........| ...:...|.|:|.|:|.:
Yeast   200 VHYAAKTGRFHYRDYTDATTTLTT-----RIPTPAIYPTEDTEGNK-LTTEYGYSTFIDHQRITV 258

  Fly   203 QETQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTLIVVPDVSVLAGVGTRAENSSRHKPG 267
            ||.....|.|.:||::::||..:||:..:.|||.:..|         |...:|....|.|     
Yeast   259 QEMPEMAPAGQLPRSIDVILDDDLVDKTKPGDRVNVVG---------VFKSLGAGGMNQS----- 309

  Fly   268 EGMDGVTGLKALGMRELNYRMAFLACSVQATTARFGGTDLPMSEVTAEDMKKQMTDAEWHKIYEM 332
             ..:.:.|.|.|          .|..:|....||..|       |.|..|   :||.:...|.::
Yeast   310 -NSNTLIGFKTL----------ILGNTVYPLHARSTG-------VAARQM---LTDFDIRNINKL 353

  Fly   333 SKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGVAKTTTEKTSLRGDINVCIVGDPSTAKSQF 397
            ||.::::..|..||.|||||:|.:|:.|||...|||.|.....:.||||||:.:||||||||||.
Yeast   354 SKKKDIFDILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPSTAKSQL 418

  Fly   398 LKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGICCIDEFDKMDQRDQ 462
            |:.|.:.:..||.|:|:.||..||||||..|.|:.:..:||||::|||.|:.||||||||...|:
Yeast   419 LRFVLNTASLAIATTGRGSSGVGLTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDR 483

  Fly   463 VAIHEAMEQQTISIARAGVRATLNARTSILAAANPINGRYDRSKSLQQNIQLSAPIMSRFDLFFI 527
            |||||.|||||::||:||:..|||||.|::|||||:.|:||.::...|||.|...::|||||.|:
Yeast   484 VAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFV 548

  Fly   528 LVDECNEVVDYAIARKIV----------------------------------DLHSNIEESVERA 558
            :.|:.||:.|.:|:..::                                  :.|||....||..
Yeast   549 VTDDINEIRDRSISEHVLRTHRYLPPGYLEGEPVRERLNLSLAVGEDADINPEEHSNSGAGVENE 613

  Fly   559 ----------------------------YTREEVLRYVT--FARQFK--------PVISQEAGHM 585
                                        |...|:.:.||  |.|::.        |.::|||.::
Yeast   614 GEDDEDHVFEKFNPLLQAGAKLAKNKGNYNGTEIPKLVTIPFLRKYVQYAKERVIPQLTQEAINV 678

  Fly   586 LVENYGHLRQRDTGTSGRSTWRITVRQLESMIRLSEAMAKLECSNRVLERHVKEAFRLLNKSIIR 650
            :|:||..||..|.....    .||.|.||::|||:.|.||:..|..|.:...|.|..||..::  
Yeast   679 IVKNYTDLRNDDNTKKS----PITARTLETLIRLATAHAKVRLSKTVNKVDAKVAANLLRFAL-- 737

  Fly   651 VEQPDIHLDDDEGLDMDD 668
                   |.:|.|.|:|:
Yeast   738 -------LGEDIGNDIDE 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 23/124 (19%)
MCM 113..649 CDD:214631 204/633 (32%)
MCM6_C 702..816 CDD:375690
MCM3NP_010882.1 MCM_N 25..>137 CDD:405270 23/128 (18%)
MCM 166..738 CDD:214631 202/625 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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