DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm6 and MCM4

DIOPT Version :9

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_015344.1 Gene:MCM4 / 856130 SGDID:S000006223 Length:933 Species:Saccharomyces cerevisiae


Alignment Length:824 Identity:265/824 - (32%)
Similarity:402/824 - (48%) Gaps:164/824 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 FQDFLEEFK-----------------EDGEIKYTRPAASLESPDRCTLEVSFEDVEKYDQNLATA 72
            |::||..||                 .|.|:.|.:....:.......|.:...::..|.|.    
Yeast   194 FRNFLMSFKYKFRKILDEREEFINNTTDEELYYIKQLNEMRELGTSNLNLDARNLLAYKQT---- 254

  Fly    73 IIEEYYHIYPFLCQSVSNYVKDRIGL--KTQKDCYVA----------FTEVPTR-HKV------- 117
              |:.||       .:.||.::.|.:  :|.|||.|:          ..|:.|: :||       
Yeast   255 --EDLYH-------QLLNYPQEVISIMDQTIKDCMVSLIVDNNLDYDLDEIETKFYKVRPYNVGS 310

  Fly   118 ----RDLTTSKIGTLIRISGQVVRTHPVHPELVSGVFMCLDCQ----TEI-RNVEQQFKFTNPTI 173
                |:|..:.|..||.:.|.|:|:.||.|::....|.|..|.    .|| |.|.|:     |..
Yeast   311 CKGMRELNPNDIDKLINLKGLVLRSTPVIPDMKVAFFKCNVCDHTMAVEIDRGVIQE-----PAR 370

  Fly   174 CRNPVCSNRKRFMLDVEKSLFLDFQKIRIQETQAELPRGCIPRAVEIILRSELVETVQAGDRYDF 238
            |....|:......|...:..|.|.|.|::|||...:|.|..|.::.:.:..|||::.:||||.:.
Yeast   371 CERIDCNEPNSMSLIHNRCSFADKQVIKLQETPDFVPDGQTPHSISLCVYDELVDSCRAGDRIEV 435

  Fly   239 TGTLIVVPDVSVLAGVGTRAENSSRHKPGEGMDGVTGLKALGMRELNYRMAFLACSVQATTARFG 303
            |||...:|         .||.:..|           .||:|      |:.......|:..:.:  
Yeast   436 TGTFRSIP---------IRANSRQR-----------VLKSL------YKTYVDVVHVKKVSDK-- 472

  Fly   304 GTDLPMSEVTAEDMK-----------KQMTDAEWHKIYEMSKDRNLYQNLISSLFPSIYGNDEVK 357
            ..|:..|.:..|.|:           :|:||.:..||.|::...:||..|..|:.||||..::||
Yeast   473 RLDVDTSTIEQELMQNKVDHNEVEEVRQITDQDLAKIREVAAREDLYSLLARSIAPSIYELEDVK 537

  Fly   358 RGILLQQFGGVAKTTTEKTSLRGDINVCIVGDPSTAKSQFLKQVSDFSPRAIYTSGKASSAAGLT 422
            :|||||.|||..||.|:....|||||:.:.|||||:|||.|:.|...:||.:|||||.|||.|||
Yeast   538 KGILLQLFGGTNKTFTKGGRYRGDINILLCGDPSTSKSQILQYVHKITPRGVYTSGKGSSAVGLT 602

  Fly   423 AAVVRDEESFDFVIEAGALMLADNGICCIDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNA 487
            |.:.||.::...|:|:|||:|:|.|:|||||||||....:..:||.|||||||||:||:..||||
Yeast   603 AYITRDVDTKQLVLESGALVLSDGGVCCIDEFDKMSDSTRSVLHEVMEQQTISIAKAGIITTLNA 667

  Fly   488 RTSILAAANPINGRYDRSKSLQQNIQLSAPIMSRFDLFFILVDECNEVVDYAIARKIVDLHSNIE 552
            |:||||:||||..||:.:..:.:||.|..|::|||||.::::|:.:|..|..:|:.:.:|:  :|
Yeast   668 RSSILASANPIGSRYNPNLPVTENIDLPPPLLSRFDLVYLVLDKVDEKNDRELAKHLTNLY--LE 730

  Fly   553 ESVERAYTREEVL------RYVTFARQ-FKPVISQEAGHMLVENY-GHLRQRDTGTSGRSTWRIT 609
            :..|. .::::||      .|:::|:: ..|:|::.|...||..| |..:..|...|.......|
Yeast   731 DKPEH-ISQDDVLPVEFLTMYISYAKEHIHPIITEAAKTELVRAYVGMRKMGDDSRSDEKRITAT 794

  Fly   610 VRQLESMIRLSEAMAKLECSNRVLERHVKEAFRLLNKSIIRVEQPDIHLDDDEGLDMDDGIQHDI 674
            .|||||||||:||.||::..|.|....|:||.||:..:|           .|...|...|   .|
Yeast   795 TRQLESMIRLAEAHAKMKLKNVVELEDVQEAVRLIRSAI-----------KDYATDPKTG---KI 845

  Fly   675 DMENNGAAANVDENNGMDTSASGAVQKKKFTLSFEDYKNLSTMLVLHMRAEEARCEVEGNDTGIK 739
            ||            |.:.|..|...:|.:..||.|         ::::..::|...:..|:. ||
Yeast   846 DM------------NLVQTGKSVIQRKLQEDLSRE---------IMNVLKDQASDSMSFNEL-IK 888

  Fly   740 RSNVVTWYLEQVADQIESEDELISRKNLIEKLIDRLIYHDQVII 783
            :.|      |...|::||.|        |::.:.||...|:||:
Yeast   889 QIN------EHSQDRVESSD--------IQEALSRLQQEDKVIV 918

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 22/112 (20%)
MCM 113..649 CDD:214631 212/571 (37%)
MCM6_C 702..816 CDD:375690 19/82 (23%)
MCM4NP_015344.1 MCM_N 194..306 CDD:405270 26/124 (21%)
MCM 310..834 CDD:214631 210/570 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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