DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm6 and Mcm8

DIOPT Version :9

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_001277983.1 Gene:Mcm8 / 66634 MGIID:1913884 Length:833 Species:Mus musculus


Alignment Length:813 Identity:243/813 - (29%)
Similarity:371/813 - (45%) Gaps:188/813 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KDEVGIRAQKLFQDFLEEFKEDGEIKYTRP---AASLESPDRCTL--------EVSFEDVEKYDQ 67
            |||:. |...:..||.|..|.| ||....|   .|..::|:: ||        :|..:|:|::..
Mouse   105 KDEIE-RKGSILVDFKELTKAD-EITNLIPDIENALRDAPEK-TLACMGLAIHQVLTKDLERHAA 166

  Fly    68 NLAT--------AIIEEYYHIYPFLCQSVSNYVKDRIGLKTQKDCYVAFTEVPTRHKVRDLTTSK 124
            .|..        ..:....|||    ..|.||                   .|..| ::::..:.
Mouse   167 ELQAQEGLSNGGETMVNVPHIY----ARVYNY-------------------EPLTH-LKNIRATC 207

  Fly   125 IGTLIRISGQVVRTHPVHPELVSGVFMCLDCQTEIRNVEQQF-----KFTNPTICRNPVCSNRKR 184
            .|..|.|.|.|||...:.|...:..|.|..| .||    |.|     |:|.||.|..|.|  |.|
Mouse   208 YGKYISIRGTVVRVSNIKPLCTNMAFQCAAC-GEI----QSFPLPDGKYTLPTKCPVPAC--RGR 265

  Fly   185 FMLDVEKS---LFLDFQKIRIQETQAELPR--GCIPRAVEIILRSELVETVQAGDRYDFTGTLIV 244
            ....:..|   :.||:|.|:|||..::..|  |.|||.:|..|..:||::...||....||.:.|
Mouse   266 SFAPLRSSPLTVTLDWQLIKIQELMSDAQREAGRIPRTIECELVHDLVDSCVPGDTVTVTGIVKV 330

  Fly   245 VPDVSVLAGVGTRAENSSRHKPGEGMDGVTGLKALGMRELNYRMAFLACSVQATTARFGGTDLPM 309
                       :.:|..||:|                   |.:..||......:.:...|   |.
Mouse   331 -----------SNSEEGSRNK-------------------NDKCMFLLYIEANSVSNSKG---PK 362

  Fly   310 SEVTAEDMKKQMTDAEW-----HKIYEMSKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGVA 369
            :: ||||..|..|..|:     :.|.|:..:.||.:.:::||.|.|:|::.||.|:.|..|||..
Mouse   363 AQ-TAEDGCKHGTLMEFSLKDLYAIREIQAEENLLKLVVNSLCPVIFGHELVKAGLTLALFGGSQ 426

  Fly   370 KTTTEKT--SLRGDINVCIVGDPSTAKSQFLKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESF 432
            |...:|.  .:|||.:|.|||||...|||.|:...:.:||.:|..|..::::|||..:.:|..|.
Mouse   427 KYADDKNRIPIRGDPHVLIVGDPGLGKSQMLQAACNVAPRGVYVCGNTTTSSGLTVTLSKDSSSG 491

  Fly   433 DFVIEAGALMLADNGICCIDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANP 497
            ||.:|||||:|.|.|||.|||||||..:.| |:.||||||:||:|:|||..:|.|||||:|||||
Mouse   492 DFALEAGALVLGDQGICGIDEFDKMGNQHQ-ALLEAMEQQSISLAKAGVVCSLPARTSIIAAANP 555

  Fly   498 INGRYDRSKSLQQNIQLSAPIMSRFDLFFILVDECNEVVDYAIARKIVDLHSNIEESVERA-YTR 561
            :.|.|::::::.:|:::.:.::|||||.|||:|..||..|:.::..::.:.:..:::|..| .||
Mouse   556 VGGHYNKARTVSENLKMGSALLSRFDLVFILLDTPNEQHDHLLSEHVIAIRAGKQKAVSSATVTR 620

  Fly   562 -----------------------------------EEVLR-YVTFARQF-KPVISQEAGHMLVEN 589
                                               .::|| |:.:|||: .|.:|.:|...|.:.
Mouse   621 VLSQDSNTSVLEVVSEKPLSERLKVAPGEQTDPIPHQLLRKYIGYARQYVHPRLSTDAAQALQDF 685

  Fly   590 YGHLRQRD--TGTSGRSTWRITVRQLESMIRLSEAMAKLECSNRVLERHVKEAFRLLNKSIIRVE 652
            |..||::.  .|:|     .||.|||||:|||:||.|:||..........::...::..|::   
Mouse   686 YLELRKQSQRVGSS-----PITTRQLESLIRLTEARARLELREEATREDAEDIIEIMKHSML--- 742

  Fly   653 QPDIHLDDDEGLDMDDGIQHDIDMENNGAAANVDENNGMDTSASGAVQKKKF-----TLSFEDYK 712
              ..:.|:...||.:.. ||...|.|...|                   |:|     :::...|.
Mouse   743 --GTYSDEFGNLDFERS-QHGSGMSNRSTA-------------------KRFISALNSIAERTYN 785

  Fly   713 NLSTMLVLHMRAEEARCEVEG--------NDTG 737
            |:.....|...|:|...:|..        ||.|
Mouse   786 NIFQYHQLRQIAKELNIQVADFENFIGSLNDQG 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 22/102 (22%)
MCM 113..649 CDD:214631 197/592 (33%)
MCM6_C 702..816 CDD:375690 11/49 (22%)
Mcm8NP_001277983.1 MCM_N 91..216 CDD:291233 31/137 (23%)
Mcm2 132..830 CDD:224162 232/784 (30%)
AAA 428..586 CDD:99707 76/158 (48%)
PEPcase <676..>747 CDD:304407 23/80 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 1 1.000 - - FOG0001226
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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