DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm6 and mcm6

DIOPT Version :9

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_001076318.1 Gene:mcm6 / 566409 ZFINID:ZDB-GENE-030909-6 Length:830 Species:Danio rerio


Alignment Length:838 Identity:514/838 - (61%)
Similarity:648/838 - (77%) Gaps:30/838 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDVADAQV----GQLRVKDEVGIRAQKLFQDFLEEFK-EDGEIKYTRPAASLESPDRCTLEVSFE 60
            ||:.:..|    ||: :|||:..:.|||||.|||||: .|||:||.|.|..|..|:|.||.|||.
Zfish     1 MDLTETGVNQNAGQV-IKDELAEKCQKLFQAFLEEFQNSDGEVKYLRDAEELIRPERNTLAVSFT 64

  Fly    61 DVEKYDQNLATAIIEEYYHIYPFLCQSVSNYVKDRIGLKTQKDCYVAFTEVPTRHKVRDLTTSKI 125
            |:|.::|.|||||.||:|.:||:||::|.|:.::...:.|.|:.||||.::|||||:|:|||.|:
Zfish    65 DLEGFNQELATAIQEEFYRLYPYLCRAVRNFAREHGEVPTSKEFYVAFQDLPTRHKIRELTTVKV 129

  Fly   126 GTLIRISGQVVRTHPVHPELVSGVFMCLDCQTEIRNVEQQFKFTNPTICRNPVCSNRKRFMLDVE 190
            |:|:|||||||||||||||||||.|:|||||..|::||||||:|.|:|||||||:||:||:||..
Zfish   130 GSLVRISGQVVRTHPVHPELVSGTFLCLDCQGVIKDVEQQFKYTQPSICRNPVCNNRRRFLLDTN 194

  Fly   191 KSLFLDFQKIRIQETQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTLIVVPDVSVLAGVG 255
            ||.|:||||:||||||||||||.|||::|:|||:|.||:.||||:.||.|:||||||:|.||..|
Zfish   195 KSKFIDFQKLRIQETQAELPRGSIPRSMEVILRAEAVESAQAGDKCDFIGSLIVVPDISQLATPG 259

  Fly   256 TRAENSSRHKPGEGM--DGVTGLKALGMRELNYRMAFLACSVQATTARFGGTDLPMSEVTAEDMK 318
            .|||.|||....:|.  :|:.||||||:|||:|::|||||.|..|..||||.::...|.|||.:|
Zfish   260 VRAETSSRTAGVQGYENEGLRGLKALGVRELSYKLAFLACHVAPTNPRFGGKEIRDEEQTAESIK 324

  Fly   319 KQMTDAEWHKIYEMSKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGVAKTTTEKTSLRGDIN 383
            |||:..||.|::|||:|:|||.||.:||||:|:|||||||||||..||||.|||.|.||||||||
Zfish   325 KQMSVQEWEKVFEMSQDKNLYHNLCTSLFPTIHGNDEVKRGILLMLFGGVPKTTMEGTSLRGDIN 389

  Fly   384 VCIVGDPSTAKSQFLKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGI 448
            ||:|||||||||||||.|.:|.|||:||||||||||||||||||||||.:||||||||||||||:
Zfish   390 VCVVGDPSTAKSQFLKHVEEFCPRAVYTSGKASSAAGLTAAVVRDEESHEFVIEAGALMLADNGV 454

  Fly   449 CCIDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANPINGRYDRSKSLQQNIQ 513
            |||||||||:.|||||||||||||||||.:|||:|||||||||||||||::|||||||||:||:.
Zfish   455 CCIDEFDKMETRDQVAIHEAMEQQTISITKAGVKATLNARTSILAAANPVSGRYDRSKSLKQNVN 519

  Fly   514 LSAPIMSRFDLFFILVDECNEVVDYAIARKIVDLHSNIEESVERAYTREEVLRYVTFARQFKPVI 578
            |:|||||||||||||||:||||.||||||:||||||.||.||:|.|:.:|:.||:.|||||||.|
Zfish   520 LTAPIMSRFDLFFILVDDCNEVTDYAIARRIVDLHSRIENSVDRVYSLDEIRRYLLFARQFKPKI 584

  Fly   579 SQEAGHMLVENYGHLRQRDTGTSGRSTWRITVRQLESMIRLSEAMAKLECSNRVLERHVKEAFRL 643
            |:|:...:||.|..|||||.....:|.||||||||||:|||||:||::.|.:.|..:||||||||
Zfish   585 SKESEEFIVEQYKRLRQRDGSGVTKSAWRITVRQLESLIRLSESMARMHCCDEVQPKHVKEAFRL 649

  Fly   644 LNKSIIRVEQPDIHLDDDE-------------GLDMDDGIQHDIDMENNGAAANVDENNGMD-TS 694
            |||||||||.||::||.:|             |.|:.:|:...::.|.||.    :..||:: ..
Zfish   650 LNKSIIRVETPDVNLDQEEEEAMEEEEDNQMNGHDVPNGVNGAVNGEVNGH----EHTNGINGHG 710

  Fly   695 ASGAVQKKKFTLSFEDYKNLSTMLVLHMRAEEARCEVEGNDTGIKRSNVVTWYLEQVADQIESED 759
            .:|...|....|||.:||.:|.:||||:|    |.|.:.::..:|:|.||.|||:::..:|:||.
Zfish   711 VNGETAKPSLRLSFAEYKRISNLLVLHLR----RAEEDEDEAALKKSEVVNWYLKEIESEIDSEM 771

  Fly   760 ELISRKNLIEKLIDRLIYHDQVIIPLKTSTLKPRIQVQKDFVEEDDPLLVVHPNYVVE 817
            ||||:|.:|||:|.||:::|.::|.||.|.||...:..:...:|:|..|||:|||..|
Zfish   772 ELISKKTMIEKVIYRLVHYDYILIELKQSGLKGSAESSETESQEEDVTLVVNPNYTFE 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 44/84 (52%)
MCM 113..649 CDD:214631 387/537 (72%)
MCM6_C 702..816 CDD:375690 49/113 (43%)
mcm6NP_001076318.1 MCM_N 27..137 CDD:291233 60/109 (55%)
MCM 117..655 CDD:214631 387/537 (72%)
P-loop_NTPase <445..532 CDD:304359 74/86 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595576
Domainoid 1 1.000 380 1.000 Domainoid score I802
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4322
Inparanoid 1 1.050 1005 1.000 Inparanoid score I285
OMA 1 1.010 - - QHG53901
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 1 1.000 - - FOG0001226
OrthoInspector 1 1.000 - - otm24257
orthoMCL 1 0.900 - - OOG6_101983
Panther 1 1.100 - - LDO PTHR11630
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R696
SonicParanoid 1 1.000 - - X2150
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.