DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm6 and mcm6l

DIOPT Version :9

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_001020704.1 Gene:mcm6l / 564982 ZFINID:ZDB-GENE-050913-141 Length:824 Species:Danio rerio


Alignment Length:818 Identity:507/818 - (61%)
Similarity:635/818 - (77%) Gaps:15/818 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LRVKDEVGIRAQKLFQDFLEEFKE-DGEIKYTRPAASLESPDRCTLEVSFEDVEKYDQNLATAII 74
            :.|:||:..:.||||.:|||||:: :|:..|...|..|..|:|.||.|||.::|.|:|.|||.|.
Zfish    10 VHVRDELSEKCQKLFLEFLEEFQDKNGDALYLSDAQELIRPERNTLTVSFSNIEHYNQQLATTIQ 74

  Fly    75 EEYYHIYPFLCQSVSNYVKDRIGLKTQKDCYVAFTEVPTRHKVRDLTTSKIGTLIRISGQVVRTH 139
            ||||.:|||||::|.::.:|...:...|:.||||:|.|:|.|:|:|:|.:||||:||||||||||
Zfish    75 EEYYRVYPFLCRAVRHFARDHGNIPPSKEFYVAFSEFPSRQKIRELSTVRIGTLLRISGQVVRTH 139

  Fly   140 PVHPELVSGVFMCLDCQTEIRNVEQQFKFTNPTICRNPVCSNRKRFMLDVEKSLFLDFQKIRIQE 204
            |||||||||.|:|||||:.|::||||||:|.||||:||||:||:|||||..||.|:||||.||||
Zfish   140 PVHPELVSGTFLCLDCQSVIKDVEQQFKYTQPTICKNPVCANRRRFMLDTNKSRFVDFQKGRIQE 204

  Fly   205 TQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTLIVVPDVSVLAGVGTRAENSSRHKPGEG 269
            ||||||||.|||:||:|||:|.|||.|||||.||||||:||||||.:|..|||||.|||....||
Zfish   205 TQAELPRGSIPRSVEVILRAEAVETAQAGDRCDFTGTLVVVPDVSAMALAGTRAETSSRVTGKEG 269

  Fly   270 M--DGVTGLKALGMRELNYRMAFLACSVQATTARFGGTDLPMSEVTAEDMKKQMTDAEWHKIYEM 332
            .  ||:.||||||:|||:||:||||..|..|..||||.:|...:.|||.:|.|||..||.|::||
Zfish   270 FETDGIQGLKALGVRELSYRLAFLANYVAPTNPRFGGKELRQEDQTAESVKNQMTVLEWEKVFEM 334

  Fly   333 SKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGVAKTTTEKTSLRGDINVCIVGDPSTAKSQF 397
            |:|:|||.||.:||||:|:||||:||||||..||||||||.|.|||||||||||||||||:||||
Zfish   335 SQDKNLYHNLCTSLFPTIHGNDEIKRGILLMLFGGVAKTTMEGTSLRGDINVCIVGDPSTSKSQF 399

  Fly   398 LKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGICCIDEFDKMDQRDQ 462
            ||.|.||:|||:|||||||||||||||||:||||.:||||||||||||||:||||||||||.:||
Zfish   400 LKHVEDFAPRAVYTSGKASSAAGLTAAVVKDEESHEFVIEAGALMLADNGVCCIDEFDKMDLKDQ 464

  Fly   463 VAIHEAMEQQTISIARAGVRATLNARTSILAAANPINGRYDRSKSLQQNIQLSAPIMSRFDLFFI 527
            ||||||||||||||.:|||:||||||||||||||||:|||:|:|||:||:.:|||||||||||||
Zfish   465 VAIHEAMEQQTISITKAGVKATLNARTSILAAANPIDGRYNRAKSLKQNVNMSAPIMSRFDLFFI 529

  Fly   528 LVDECNEVVDYAIARKIVDLHSNIEESVERAYTREEVLRYVTFARQFKPVISQEAGHMLVENYGH 592
            ||||||||.||||||:|||||:...|||||.|:.:|:.||:.|||||:|.|:.||...:|:.|..
Zfish   530 LVDECNEVTDYAIARRIVDLHARNVESVERVYSTDEIQRYILFARQFQPKITVEAQEFVVDQYKR 594

  Fly   593 LRQRDTGTSGRSTWRITVRQLESMIRLSEAMAKLECSNRVLERHVKEAFRLLNKSIIRVEQPDIH 657
            |||||.|.:.:|.|||||||||||:||||.||:|.||:.|..:||||||||||||||||:.|||:
Zfish   595 LRQRDGGGTTKSAWRITVRQLESMLRLSEGMARLYCSDEVQPKHVKEAFRLLNKSIIRVDSPDIN 659

  Fly   658 LD---DDEGL-DMDDGIQHDIDMEN----NGAAANVDENNGMDTSASGAVQKKKFTLSFEDYKNL 714
            .|   |::.: |.::....:.:.:|    ||.|....|.:..:.....|..|....:||.:||.:
Zfish   660 FDQEHDEDNINDQNELFGKETEGQNGGDVNGHAVEDMETDQTEKPEKPAAAKPALRMSFAEYKRV 724

  Fly   715 STMLVLHMRAEEARCEVEGNDTGIKRSNVVTWYLEQVADQIESEDELISRKNLIEKLIDRLIYHD 779
            |.:|||||:..|...|    |:.:|:|.::.|||:::..:|:||.||:::|||||:::.|||..|
Zfish   725 SNLLVLHMQKMEQLDE----DSSLKKSELINWYLKEIESEIDSEAELVAKKNLIERVLYRLINFD 785

  Fly   780 QVIIPLKTSTLKPRIQVQKDFVEEDDPLLVVHPNYVVE 817
            .:||.|..:.||...:..::.|.||||.|||.|||::|
Zfish   786 HIIIELTKTGLKKISEDGEEPVSEDDPFLVVDPNYILE 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 39/84 (46%)
MCM 113..649 CDD:214631 393/537 (73%)
MCM6_C 702..816 CDD:375690 48/113 (42%)
mcm6lNP_001020704.1 MCM_N 23..133 CDD:291233 54/109 (50%)
MCM 116..651 CDD:214631 392/534 (73%)
P-loop_NTPase <441..528 CDD:304359 73/86 (85%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595577
Domainoid 1 1.000 380 1.000 Domainoid score I802
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1005 1.000 Inparanoid score I285
OMA 1 1.010 - - QHG53901
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 1 1.000 - - FOG0001226
OrthoInspector 1 1.000 - - otm24257
orthoMCL 1 0.900 - - OOG6_101983
Panther 1 1.100 - - O PTHR11630
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2150
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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