DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm6 and mcm9

DIOPT Version :9

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_001333089.1 Gene:mcm9 / 555610 ZFINID:ZDB-GENE-041014-310 Length:1135 Species:Danio rerio


Alignment Length:775 Identity:233/775 - (30%)
Similarity:356/775 - (45%) Gaps:169/775 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QVGQLRVKD---EVGIRAQKLFQDFLEEFKEDGEIKYTRPAASLESPDRCTLEVSFEDVEKYDQN 68
            |:.|...:|   .|.:.|..||:|.:|.    ||.....|:..|...|...            |.
Zfish    31 QILQENTEDLHYPVVVNAMTLFEDNMEV----GECFNAFPSKVLPIFDNAL------------QR 79

  Fly    69 LATAIIEEYYHIYPFLCQSVSNYVKDRIGLKTQKDCYVAFTEVP-----TRH---KVRDLTTSKI 125
            .|.||           .||.|:..:|...||  .:.:|..:.:|     ||.   |.||     :
Zfish    80 AAQAI-----------SQSSSSSPQDTFRLK--HNMHVRISGLPVCPELTRDHIPKARD-----V 126

  Fly   126 GTLIRISGQVVRTHPVHPELVSGVFMCLDCQTEIRNV-------EQQFKFTNPTICRNPV-CSNR 182
            |..:.::|.|:||...........:||..|    |:|       ||.:.||.||.|.:.. |.:.
Zfish   127 GHFLSVTGTVIRTSVTKVLEYERDYMCNKC----RHVFSVQASFEQFYTFTPPTSCPSEEGCGSF 187

  Fly   183 KRFML---DVEKSLFLDFQKIRIQETQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTLIV 244
            |...|   |...:...|:|:|:|||...:|..|.|||::.|||..:||::.::||          
Zfish   188 KFTCLSGSDAPPAACKDYQEIKIQEQVQKLSVGSIPRSMLIILEDDLVDSCKSGD---------- 242

  Fly   245 VPDVSVLAGVGTRAENSSRHKPGEGM------DGVTGLKALGMRELNYRMAFLACSVQATTARFG 303
              |::|...|      ..|.||   |      |....||| ...|:|        :.|:|||   
Zfish   243 --DITVYGVV------CQRWKP---MFQDCRCDVEIVLKA-NYIEVN--------NEQSTTA--- 284

  Fly   304 GTDLPMSEVTAEDMKKQMTDAEW--HKIYEMSKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFG 366
                    :..||::|:..:. |  || ::....||   .::.||.|.::|...||..:.:...|
Zfish   285 --------LVLEDIQKEFEEF-WDSHK-HDPIAGRN---EILMSLCPQVFGMYVVKLAVAMVLAG 336

  Fly   367 GVAKTTTEKTSLRGDINVCIVGDPSTAKSQFLKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEES 431
            ||.:.....|.:||:.::.:||||.|.||||||..:..:||::.|:|..|:.||||.|.|:|  |
Zfish   337 GVQRIDASGTKVRGESHLLLVGDPGTGKSQFLKYAAKITPRSVLTAGIGSTNAGLTVAAVKD--S 399

  Fly   432 FDFVIEAGALMLADNGICCIDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAAN 496
            .::.:|||||:|:|.|:||||||:.:.:.|:.:|||||||||||:|:||:...|:.||:||||.|
Zfish   400 GEWHLEAGALVLSDGGLCCIDEFNSIKEHDRTSIHEAMEQQTISVAKAGMVCKLDTRTTILAATN 464

  Fly   497 PINGRYDRSKSLQQNIQLSAPIMSRFDLFFILVDECNEVVDYAIARKIVDLHSNIEESVERAYTR 561
            | .|:||.:.|:..|:.|::|::|||||..:|:|..|...|..|:..|:.......||: ..::.
Zfish   465 P-KGQYDPNVSVSVNVALASPLLSRFDLVLVLLDTKNPDWDKIISSFILQNKGAPSESL-CLWSM 527

  Fly   562 EEVLRYVTFARQFKPVISQEAGHMLVENYGHLRQRDTGTSGRSTWRITVRQLESMIRLSEAMAKL 626
            |::..|....:..||.|:.||..:|...|...||.|:    |:..|.|:|.|||:.||:||.|:|
Zfish   528 EKMRAYFCLIKTLKPRITPEANTILSRYYQLQRQSDS----RNAARTTIRMLESLSRLAEAHARL 588

  Fly   627 ------------------ECSNRVLERHVKEAFRLLNKSIIRVEQPDIHLDDD--------EGLD 665
                              |||       ::....|.|.:.:....||...:..        |.|.
Zfish   589 MFRETVTVEDAVVVVSVMECS-------MQGGALLGNVNALHTSFPDEPCEQYKTQCEIVLERLG 646

  Fly   666 MDDGIQHDIDMENNGAAANVDENNGMDTSASGAVQKKKFTLSFEDYKNLSTMLVLHMRAE 725
            :.|.:|.::           ...:|:.....|:   .|...|..:::|.:|....|...|
Zfish   647 LSDLLQREL-----------QRLSGLQNGRPGS---PKSPQSHSEHRNENTTSTNHSNQE 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 19/83 (23%)
MCM 113..649 CDD:214631 193/575 (34%)
MCM6_C 702..816 CDD:375690 6/24 (25%)
mcm9NP_001333089.1 Mcm2 23..588 CDD:224162 213/648 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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