DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm6 and mcm5

DIOPT Version :10

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_001017327.2 Gene:mcm5 / 550081 XenbaseID:XB-GENE-985665 Length:735 Species:Xenopus tropicalis


Alignment Length:679 Identity:212/679 - (31%)
Similarity:339/679 - (49%) Gaps:82/679 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DVADAQVGQLRVKDEVGIRAQKLFQDFLEEFKEDGE-----IKYTRPAASLESPDRCTLEVSFED 61
            |...|:..||:          |.|::||.:::...:     .||........:.....:||..||
 Frog    23 DDGQAKKSQLK----------KRFREFLRQYRVGTDRTGFTFKYRDELKRHYNLGEYWIEVEMED 77

  Fly    62 VEKYDQNLATAIIEEYYHIYPF----LCQSVSNYVKDRI------GLKTQKDCYVAFTEVPTRHK 116
            :..:|::||     :|.:..|.    |.:..:..|.|.:      |.:|.::..|..........
 Frog    78 LASFDEDLA-----DYLYKQPTEHLQLLEEAAQEVADEVTRPRPAGEETIQEIQVMLRSDANPAN 137

  Fly   117 VRDLTTSKIGTLIRISGQVVRTHPVHPELVSGVFMCLDCQTEIRNVEQQ---FKFTNPTICR--- 175
            :|.|.:.::..|::|.|.::....|..:.......|..|:..|.|:..:   ..:..|..|.   
 Frog   138 IRSLKSEQMSHLVKIPGIIIAATAVRAKATKISIQCRSCRNTIGNIAVRPGLEGYAMPRKCNTEQ 202

  Fly   176 --NPVCSNRKRFMLDVEKSLFLDFQKIRIQETQAELPRGCIPRAVEIILRSELVETVQAGDRYDF 238
              .|.|.....|::. :|...:|||.:::||:...:|.|.:||.:::.....|.:.|..|:|   
 Frog   203 AGRPKCPLDPYFIIP-DKCKCVDFQTLKLQESPDAVPHGELPRHMQLYCDRYLCDKVVPGNR--- 263

  Fly   239 TGTLIVVPDVSVLAGVGTRAENSSRHKPGEGMDGVTGLKALGMRELNYRMAFLACSVQATTARFG 303
                     |:::.....|....:..|   |.|.|    .:|:|....|:..:....:.|.....
 Frog   264 ---------VTIMGIYSIRKSGKTSTK---GRDRV----GVGIRSSYIRVVGIQVDTEGTGRSAA 312

  Fly   304 GTDLPMSEVTAEDMKKQMTDAEWHKIYEMSKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGV 368
            |...|..|   |:.::            :|...::|:.:..|:.|||||:.::|:.|....|||.
 Frog   313 GAITPQEE---EEFRR------------LSAKPDIYETVAKSIAPSIYGSSDIKKAIACLLFGGS 362

  Fly   369 AKTTTEKTSLRGDINVCIVGDPSTAKSQFLKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESFD 433
            .|...:..:.|||:|:.::|||.|||||.||.|...||..:|||||.||||||||:|:||..|.:
 Frog   363 RKRLPDGLTRRGDVNLLMLGDPGTAKSQLLKFVERCSPIGVYTSGKGSSAAGLTASVMRDPVSRN 427

  Fly   434 FVIEAGALMLADNGICCIDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANPI 498
            |::|.||::|||.|:.||||||||.:.|:|||||||||||||||:||:..|||:|.|:|||||.:
 Frog   428 FIMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSV 492

  Fly   499 NGRYDRSKSLQQNIQLSAPIMSRFDLFFILVDECNEVVDYAIARKIVDLHSNI---EESVERAYT 560
            .||:|.:|. ::||.....|:||||:.||:.||.||..|..:|:.::::|.:.   ..|||....
 Frog   493 YGRWDDTKG-EENIDFMPTILSRFDMIFIVKDEHNEQRDMTLAKHVMNVHLSARTQSSSVEGEID 556

  Fly   561 REEVLRYVTFAR-QFKPVISQEAGHMLVENY----GHLRQRDTGTSGRSTWRITVRQLESMIRLS 620
            ...:.:|:.:.| :..|.:|.|:...|...|    ...|..:..|..||:..|||||||:::|:|
 Frog   557 LNTLKKYIAYCRAKCGPRLSAESAEKLKNRYILMRSGARDHERETEKRSSIPITVRQLEAIVRIS 621

  Fly   621 EAMAKLECSNRVLERHVKEAFRLLNKSII 649
            |::.|::......|..|:||.||...|.:
 Frog   622 ESLGKMKLQPFATETDVEEALRLFQVSTL 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 22..109 CDD:464206 21/101 (21%)
MCM 113..649 CDD:475121 187/551 (34%)
MCM6_C 702..816 CDD:465688
mcm5NP_001017327.2 MCM_N 33..131 CDD:464206 21/112 (19%)
MCM 134..650 CDD:214631 187/551 (34%)
Arginine finger 513..516 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.

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