DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm6 and mcm5

DIOPT Version :9

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_001017327.2 Gene:mcm5 / 550081 XenbaseID:XB-GENE-985665 Length:735 Species:Xenopus tropicalis


Alignment Length:679 Identity:212/679 - (31%)
Similarity:339/679 - (49%) Gaps:82/679 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DVADAQVGQLRVKDEVGIRAQKLFQDFLEEFKEDGE-----IKYTRPAASLESPDRCTLEVSFED 61
            |...|:..||:          |.|::||.:::...:     .||........:.....:||..||
 Frog    23 DDGQAKKSQLK----------KRFREFLRQYRVGTDRTGFTFKYRDELKRHYNLGEYWIEVEMED 77

  Fly    62 VEKYDQNLATAIIEEYYHIYPF----LCQSVSNYVKDRI------GLKTQKDCYVAFTEVPTRHK 116
            :..:|::||     :|.:..|.    |.:..:..|.|.:      |.:|.::..|..........
 Frog    78 LASFDEDLA-----DYLYKQPTEHLQLLEEAAQEVADEVTRPRPAGEETIQEIQVMLRSDANPAN 137

  Fly   117 VRDLTTSKIGTLIRISGQVVRTHPVHPELVSGVFMCLDCQTEIRNVEQQ---FKFTNPTICR--- 175
            :|.|.:.::..|::|.|.::....|..:.......|..|:..|.|:..:   ..:..|..|.   
 Frog   138 IRSLKSEQMSHLVKIPGIIIAATAVRAKATKISIQCRSCRNTIGNIAVRPGLEGYAMPRKCNTEQ 202

  Fly   176 --NPVCSNRKRFMLDVEKSLFLDFQKIRIQETQAELPRGCIPRAVEIILRSELVETVQAGDRYDF 238
              .|.|.....|::. :|...:|||.:::||:...:|.|.:||.:::.....|.:.|..|:|   
 Frog   203 AGRPKCPLDPYFIIP-DKCKCVDFQTLKLQESPDAVPHGELPRHMQLYCDRYLCDKVVPGNR--- 263

  Fly   239 TGTLIVVPDVSVLAGVGTRAENSSRHKPGEGMDGVTGLKALGMRELNYRMAFLACSVQATTARFG 303
                     |:::.....|....:..|   |.|.|    .:|:|....|:..:....:.|.....
 Frog   264 ---------VTIMGIYSIRKSGKTSTK---GRDRV----GVGIRSSYIRVVGIQVDTEGTGRSAA 312

  Fly   304 GTDLPMSEVTAEDMKKQMTDAEWHKIYEMSKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGV 368
            |...|..|   |:.::            :|...::|:.:..|:.|||||:.::|:.|....|||.
 Frog   313 GAITPQEE---EEFRR------------LSAKPDIYETVAKSIAPSIYGSSDIKKAIACLLFGGS 362

  Fly   369 AKTTTEKTSLRGDINVCIVGDPSTAKSQFLKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESFD 433
            .|...:..:.|||:|:.::|||.|||||.||.|...||..:|||||.||||||||:|:||..|.:
 Frog   363 RKRLPDGLTRRGDVNLLMLGDPGTAKSQLLKFVERCSPIGVYTSGKGSSAAGLTASVMRDPVSRN 427

  Fly   434 FVIEAGALMLADNGICCIDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANPI 498
            |::|.||::|||.|:.||||||||.:.|:|||||||||||||||:||:..|||:|.|:|||||.:
 Frog   428 FIMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSV 492

  Fly   499 NGRYDRSKSLQQNIQLSAPIMSRFDLFFILVDECNEVVDYAIARKIVDLHSNI---EESVERAYT 560
            .||:|.:|. ::||.....|:||||:.||:.||.||..|..:|:.::::|.:.   ..|||....
 Frog   493 YGRWDDTKG-EENIDFMPTILSRFDMIFIVKDEHNEQRDMTLAKHVMNVHLSARTQSSSVEGEID 556

  Fly   561 REEVLRYVTFAR-QFKPVISQEAGHMLVENY----GHLRQRDTGTSGRSTWRITVRQLESMIRLS 620
            ...:.:|:.:.| :..|.:|.|:...|...|    ...|..:..|..||:..|||||||:::|:|
 Frog   557 LNTLKKYIAYCRAKCGPRLSAESAEKLKNRYILMRSGARDHERETEKRSSIPITVRQLEAIVRIS 621

  Fly   621 EAMAKLECSNRVLERHVKEAFRLLNKSII 649
            |::.|::......|..|:||.||...|.:
 Frog   622 ESLGKMKLQPFATETDVEEALRLFQVSTL 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 20/98 (20%)
MCM 113..649 CDD:214631 187/551 (34%)
MCM6_C 702..816 CDD:375690
mcm5NP_001017327.2 MCM_N 36..131 CDD:379644 20/99 (20%)
MCM 134..650 CDD:214631 187/551 (34%)
Arginine finger 513..516 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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