DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm6 and Mcm5

DIOPT Version :9

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster


Alignment Length:678 Identity:223/678 - (32%)
Similarity:344/678 - (50%) Gaps:84/678 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DAQVGQLRVKDEVGIRAQKLFQDFLEEFKEDGEI-KYTRPAASLESPDRCTLEVSFEDVEKYDQN 68
            |||:....||        |.:::|:..|.|:... ||...........|..||:..||:..:|:.
  Fly    22 DAQINLQAVK--------KKYKEFIRTFNEENFFYKYRDTLKRNYLNGRYFLEIEMEDLVGFDET 78

  Fly    69 LATAIIE---EYYHIYPFLCQSVSNYVKDRIGL------KTQKDCYVAFTEVPTRHKVRDLTTSK 124
            ||..:.:   |:..|:    :..:..|.|.|..      :...|..:..:.......:|.|.:..
  Fly    79 LADKLNKQPTEHLEIF----EEAAREVADEITAPRPEHEEHMHDIQILLSSNANPTNIRQLKSDC 139

  Fly   125 IGTLIRISGQVVRTHPVHPELVSGVFMCLDCQTEIRNVEQQFKFTNPTI--------CR-----N 176
            :..|::|:|.:|....:..:.......||.|.|.|.|::     .||.:        |.     .
  Fly   140 VSKLVKIAGIIVAASGISAKATRMSIQCLSCSTVIPNLK-----VNPGLEGYALPRKCNTEQAGR 199

  Fly   177 PVCSNRKRFMLDVEKSLFLDFQKIRIQETQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGT 241
            |.|.....|::. :|...:|||.:::||....:|:|.|||.:::.....|.|.|..|:|      
  Fly   200 PKCPLDPFFIMP-DKCKCVDFQTLKLQELPDFVPQGEIPRHLQLFCDRSLCERVVPGNR------ 257

  Fly   242 LIVVPDVSVLAGVGTRAENSSRHKPGEGMDGVTGLKALGMRELNYRMAFLACSVQATTARFGGTD 306
             :::..:..:..||..:....|.|      .|.|::|..||       .:..:|.:..|   |..
  Fly   258 -VLIQGIYSIRKVGKPSRRDGREK------AVVGVRAPYMR-------VVGITVDSEGA---GAI 305

  Fly   307 LPMSEVTAEDMKKQMTDAEWHKIYEMSKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGVAKT 371
            ...|.:|        :|.|.| ...|:...::|:.|..||.|||:|:.::|:.|....|||..|.
  Fly   306 SRYSNIT--------SDEEEH-FRRMAASGDIYERLSQSLAPSIFGSRDIKKAITCMLFGGSRKR 361

  Fly   372 TTEKTSLRGDINVCIVGDPSTAKSQFLKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVI 436
            ..:....||||||.::|||.|||||.||.|...:|.|:|||||.||||||||:|::|.::.:||:
  Fly   362 LPDGLCRRGDINVLLLGDPGTAKSQLLKFVEKVAPIAVYTSGKGSSAAGLTASVMKDPQTRNFVM 426

  Fly   437 EAGALMLADNGICCIDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANPINGR 501
            |.||::|||.|:.||||||||.:.|:|||||||||||||||:||:..|||:|.|:|||||.|.||
  Fly   427 EGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSIFGR 491

  Fly   502 YDRSKSLQQNIQLSAPIMSRFDLFFILVDECNEVVDYAIARKIVDLHSNIEESVERAYTREEV-- 564
            :|.:|. ::||.....|:||||:.||:.|..:|..|..:|:.|:::|.:..:|........|:  
  Fly   492 WDDTKG-EENIDFMPTILSRFDMIFIVKDIHDESRDITLAKHIINVHLSSNKSAPSEPAEGEISL 555

  Fly   565 ---LRYVTFAR-QFKPVISQEAGHMLVENYGHLR----QRDTGTSGRSTWRITVRQLESMIRLSE 621
               .:|:.:.| ...|.:|:.||..|...|..:|    |::..:..|.:..|||||||::||:||
  Fly   556 STFKKYIHYCRTHCGPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSIPITVRQLEAVIRISE 620

  Fly   622 AMAKLECSNRVLERHVKEAFRLLNKSII 649
            ::||:.......:.||.||.||...|.:
  Fly   621 SLAKIRLQPFATDEHVNEALRLFQVSTL 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 19/93 (20%)
MCM 113..649 CDD:214631 198/558 (35%)
MCM6_C 702..816 CDD:375690
Mcm5NP_524308.2 MCM_N 31..124 CDD:405270 21/104 (20%)
MCM 128..648 CDD:214631 198/558 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469739
Domainoid 1 1.000 52 1.000 Domainoid score I661
eggNOG 1 0.900 - - E1_COG1241
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D15169at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11630
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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