DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm6 and mei-218

DIOPT Version :9

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_001027068.1 Gene:mei-218 / 3772646 FlyBaseID:FBgn0002709 Length:1186 Species:Drosophila melanogaster


Alignment Length:756 Identity:123/756 - (16%)
Similarity:235/756 - (31%) Gaps:262/756 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QKLFQDFLEEFKEDGEIKYTRPAASLESPDRCTLEVSFEDVEKYDQNLATAIIEEYYHIYPFLCQ 86
            |.:.::|.|...|         .:|.::|::..  |.::..||..|..::..|....|:......
  Fly   479 QAVSREFTESLLE---------GSSGKTPEKEV--VPYQQQEKPRQVKSSPEIHASSHMRKLAMG 532

  Fly    87 SVSN------------YVKDRIGLKTQKDCYVAFTEVPTRHKVRDLTTSKIGTLIRISGQVVRTH 139
            ||.|            ::..::...:|:.|...||        |.|...|               
  Fly   533 SVLNSNAKEFHPTGESHLTHKVSRLSQRRCRQRFT--------RSLHAKK--------------- 574

  Fly   140 PVHPELVSGVFMCLDCQTEIRNVEQQFKFTNPTICRNPVCSNRKRFMLDVEKSLFLDFQKIRIQE 204
                                .|..:|  ..||.....|:          :|.:..:|.|...   
  Fly   575 --------------------NNPREQ--LPNPDSAPEPI----------LEYTSEIDDQPCP--- 604

  Fly   205 TQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTLIVVPDVSVL-AGVGTRAENSSRHKPGE 268
                 ||..:...:|.|:...::|....|:          :|.|... ...|....|||...|.|
  Fly   605 -----PRQTVDTPIEAIVPPAMIEVSATGN----------LPPVFYFDQQSGIIWSNSSPQIPVE 654

  Fly   269 GMDGVTGLKALGMRELNYRMAFLACSVQATT-----------------ARF-----GGTDL---- 307
                   :::..:.:..:|:|.|.|:...||                 :|.     |.|.|    
  Fly   655 -------IQSNSVSQSVFRLASLPCTGVGTTNMDIFTSSPPPIQHMSSSRLPSSISGPTQLSHTL 712

  Fly   308 ----------------------------PMSEVTAEDMKKQMTDAEW------------------ 326
                                        |:.::..|:.:.:..|.||                  
  Fly   713 SSPPVENQHQQHLWESCIHQDEDLMYSRPLLDMDQEETQPEQQDQEWQWESEIEPPSFQSENQVV 777

  Fly   327 ---------------------HKIYEM-----------------SKDRNLYQNLISSLFPS---I 350
                                 |.|:..                 |..:.|: :||||.:..   :
  Fly   778 ADEHGEENAYLAKDAGPPLERHMIFRAPSQHGQEYPKPDLNCVPSSIKKLH-HLISSQYSDYSFV 841

  Fly   351 YG-NDEVKRG-------ILLQQFGGVAKTTTEKTSLRGDINVCIVGDPSTAKSQFLKQVSDFSPR 407
            |. :.::.:.       :.|:.....:..:.|...:|..|::||:...|...::.|.:|...:||
  Fly   842 YALSAQISQDCVPMDCFVYLKMILLASIVSIESDEVRAPISLCIIATDSLMANRLLNKVGQLAPR 906

  Fly   408 AIYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGICCIDEFDKMDQRDQVAIHEAMEQQ 472
            .:     .....||..........|:::: |..|:||..|:....:::::.:.....:.:.:|..
  Fly   907 FL-----GPHEYGLQPTFNALPTRFNWIV-ASPLLLAQQGVYYAGDWNRLSKDQGCQLEKCIENG 965

  Fly   473 TISIARAGVRATLNARTSILAAANPINGRYDRSKSLQQNIQLS--APIMSRFDLFFILVDECNEV 535
            .:.:.:..:...|.|  ::.....|.|       |..|.:.|:  .||   |.|...:..:.:. 
  Fly   966 AVPVPQLHIDQPLKA--AVWTYWQPNN-------STNQTLALAKLCPI---FGLPIYMGAQASN- 1017

  Fly   536 VDYAIARKIVDLHSNIEESV----ERAYTREEVLRYVTFARQFKPVISQEAGHMLVENYGHLRQR 596
               ::...|:..| |.|..:    ..:...:::...:....|.|..::..|.|||.:.|...|:.
  Fly  1018 ---SLWNSIIQKH-NAEGQIVVNDGLSIPEDDMRMLIHLLHQRKTTLTDGAQHMLQKYYVISRKE 1078

  Fly   597 DTGTSGRSTWRITVRQLESMIRLSEAMAKLECSNRVLERHV 637
            ........|: |.::|      |:|..|||.....|||..|
  Fly  1079 RPNVFSSKTY-IVLKQ------LAECFAKLALRLEVLESDV 1112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 16/95 (17%)
MCM 113..649 CDD:214631 104/653 (16%)
MCM6_C 702..816 CDD:375690
mei-218NP_001027068.1 PTZ00112 122..>417 CDD:240274
MCM <1023..1116 CDD:278895 24/98 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11630
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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