DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm6 and Mcm7

DIOPT Version :9

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_001004203.3 Gene:Mcm7 / 288532 RGDID:1303018 Length:719 Species:Rattus norvegicus


Alignment Length:692 Identity:218/692 - (31%)
Similarity:337/692 - (48%) Gaps:107/692 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LRVKDEVGIRAQKLFQDFLEEFKEDGEI-----KYTRPAASLESPDRCTLEVSFEDVEKYDQNLA 70
            :.:|| ..|..:|: :.||:||..|.|:     ||......|...::..|.|..:||.:.|..|.
  Rat     1 MALKD-YAIEKEKV-KKFLQEFYYDDELGKKQFKYGTQLVHLAHREQVALYVDLDDVAEDDPELV 63

  Fly    71 TAIIE---EYYHIYPFLCQS-VSNYVKDRIGLKTQKDCYV------------------------- 106
            .:|.|   .|..::..:.|. :..|.:..:..|...|.|:                         
  Rat    64 DSICENAKRYSRLFADVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPS 128

  Fly   107 -------AFTEVPTRHK---VRDLTTSKIGTLIRISGQVVRTHPVHPELVSGVFMCLDCQTEIRN 161
                   .:.:.|:..|   :|::....:|.|:.:.|.|.|...|.|.:|...:.|..|..|...
  Rat   129 ELMRRFELYFQGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQ 193

  Fly   162 VEQQFKFTNPTICRNPVC-SNRK--RFMLDVEKSLFLDFQKIRIQETQAELPRGCIPRAVEIILR 223
            ..|...|....:|.:..| :||.  |..|....|.|:.||:::|||...::|.|.|||::.::|.
  Rat   194 PIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFIKFQEMKIQEHSDQVPVGNIPRSITVVLE 258

  Fly   224 SELVETVQAGDRYDFTGTLIVVPDVSVLAGVGTRAENSSRHKPGEGMDGVTGLK--ALGMRELNY 286
            .|.....|.||....||  |.:|   ||.                     ||.:  |.|:....|
  Rat   259 GENTRIAQPGDHVSVTG--IFLP---VLR---------------------TGFQQMAQGLLSETY 297

  Fly   287 RMAFLACSVQATTARFGGTDLPMSEVTAEDMKKQMTDAEWHKIYEMSKDRNLYQNLISSLFPSIY 351
            ..|.....:..:.....|.    .|::||::|:             ..:.:.|:.|.:|:.|.||
  Rat   298 LEAHRVVKMTKSEDDVSGA----GELSAEELKQ-------------IAEEDFYEKLAASIAPEIY 345

  Fly   352 GNDEVKRGILLQQFGGVAKTTTEKTSLRGDINVCIVGDPSTAKSQFLKQVSDFSPRAIYTSGKAS 416
            |:::||:.:||...|||.: :.:...:||:|::|::|||..||||.|..:...:||:.||:|:.|
  Rat   346 GHEDVKKALLLLLVGGVDQ-SPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGS 409

  Fly   417 SAAGLTAAVVRDEESFDFVIEAGALMLADNGICCIDEFDKMDQRDQVAIHEAMEQQTISIARAGV 481
            |..||||||:||..|.:..:|.|||:|||.|:|||||||||.:.|:.||||.|||||||||:||:
  Rat   410 SGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGI 474

  Fly   482 RATLNARTSILAAANPINGRYDRSKSLQQNIQLSAPIMSRFDLFFILVDECNEVVDYAIARKIVD 546
            ..|||||.||||||||..|||:..:||:|||||.|.::|||||.:::.|..:...|..:|:.|..
  Rat   475 LTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITY 539

  Fly   547 LHSNIE------ESVERAYTREEVLRYVTFARQFKPVISQEAGHMLVENYGHLRQRDTGTSGRST 605
            :|.:..      |.::....|    ||:...|:.:|.:.......:...|..:| |:...|..:|
  Rat   540 VHQHSRQPPAQFEPLDMKLMR----RYIAMCRERQPTVPDSLADYITAAYVEMR-REARASKDAT 599

  Fly   606 WRITVRQLESMIRLSEAMAKLECSNRVLERHVKEAFRLLNKS 647
            : .:.|.|.:::|||.|:|:|...:.|.:..|.||.||:..|
  Rat   600 Y-TSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 23/124 (19%)
MCM 113..649 CDD:214631 190/549 (35%)
MCM6_C 702..816 CDD:375690
Mcm7NP_001004203.3 MCM_N 12..165 CDD:291233 29/153 (19%)
MCM 145..641 CDD:214631 190/546 (35%)
P-loop_NTPase 376..515 CDD:304359 83/138 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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