DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm6 and Mcmdc2

DIOPT Version :10

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_808390.2 Gene:Mcmdc2 / 240697 MGIID:3045334 Length:681 Species:Mus musculus


Alignment Length:630 Identity:126/630 - (20%)
Similarity:221/630 - (35%) Gaps:187/630 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LCQSVSNYVKDRIGLKTQKDCYVAFTEVPTRHK--VRDLTTSKIGTLIRISGQVVRTH---PVHP 143
            ||:...||...|..:  .:...:|.|.: |::.  .|.|.:..:..|.: ..|.||.|   ....
Mouse   115 LCEFPLNYASQRFYM--MQGIVIAMTTI-TKYTQGARFLCSDGVCPLSK-GFQYVRVHVPGATES 175

  Fly   144 ELVSGVFMCLDCQTEIRNVEQQFKFTNPTICRNPVCSNRKRFMLDVEKSLFLDF------QKIRI 202
            ..|...|:|..|.:.::. :::|:....           |:.:..:...:|..|      |..|.
Mouse   176 ATVRNDFLCSLCSSSLQE-DRKFRVLGD-----------KQIVEIITTKMFHAFQGDSKNQPFRF 228

  Fly   203 QETQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTLIVVPDVSVLAGVGTRAENSSRHKPG 267
            |             ::.|.||.|||..::.|:.|...|..:.|........|  .|.|.:.|   
Mouse   229 Q-------------SLGIFLRDELVNKMKIGNEYKIIGIPVCVKTSQTALCV--EANNITPH--- 275

  Fly   268 EGMDGVTGLKALGMRELNYR-------------MAFLACSVQATTARFGGT------DLPMSEVT 313
                  |....||:.: |:|             .|.|| :|.|:.....||      .|.||.|.
Mouse   276 ------TAKVPLGISD-NFRRLLSLTSSSCWKFTAMLA-NVFASQIVAPGTYNLLKLCLLMSLVQ 332

  Fly   314 AEDMKKQMTDAEWHKIYEMSKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGVAKTTTEKTSL 378
            ..|..::..|.  ..|..::.|..|...|::      :..:.|.|||...               
Mouse   333 TRDCNREREDC--LDILVITSDTLLVDRLLN------FSMNLVSRGIRHP--------------- 374

  Fly   379 RGDINVCIVGDPSTAKSQFLKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVIEAGALML 443
                 ||....|:.::::             |.:|..|                   |:||:.:|
Mouse   375 -----VCTEVFPTVSRNK-------------YGTGAVS-------------------IQAGSALL 402

  Fly   444 ADNGICCIDEF-----DKMDQRDQVAIHEAMEQQTISIARAGVR--------ATLNARTSILAAA 495
            |..|||.|.:.     ||::|     :..|:|.:::::...|.:        .|...:.|..:..
Mouse   403 AKGGICFIGDLTSHKKDKLEQ-----LQSALESRSVTVFIPGKKFGDDFDQQMTFPIQCSFWSFV 462

  Fly   496 NPINGRYDRSKSLQQNIQLSAPIMSRFDLFFI---------LVDECNEVVDYAIARKIVDLHSNI 551
                   |...|.::|:|.::.::.:.|...|         |:..|:|      |.....|...:
Mouse   463 -------DMDSSSRRNVQKTSTLIGQMDCSLIPANLAEAFGLLINCSE------ASPCHPLLPTV 514

  Fly   552 EESVERA-------------YTREEVLRYVTFARQFKPVISQEAGHMLVENYGHLRQRDTGTSGR 603
            :.::::|             :|.|:..:.:.||:......|.||..| :..| :|..|...|...
Mouse   515 QHTLKKAVEPEGLLYLASKQFTTEDFEKLLAFAKSLNMEFSLEAERM-IHGY-YLASRRIRTDSI 577

  Fly   604 STWRITVRQLESMIRLSEAMAKLECSNRVLERHVKEAFRLLNKSI 648
            ...:::...|:.::.||||.|:|.....||......|..||..|:
Mouse   578 HGSKLSASALKYLVSLSEAHARLSLRTTVLREDALIAALLLEISL 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 22..109 CDD:464206 6/24 (25%)
MCM 113..649 CDD:475121 119/601 (20%)
MCM6_C 702..816 CDD:465688
Mcmdc2NP_808390.2 MCM <395..621 CDD:475121 53/245 (22%)
MCM_lid <557..622 CDD:465534 19/66 (29%)
Blue background indicates that the domain is not in the aligned region.

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