DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm6 and mcm2

DIOPT Version :10

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_775364.2 Gene:mcm2 / 192338 ZFINID:ZDB-GENE-020419-24 Length:889 Species:Danio rerio


Alignment Length:680 Identity:220/680 - (32%)
Similarity:351/680 - (51%) Gaps:96/680 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VKDEVGIRAQKL-----FQDFLE-EFKEDGEIKYTRPAASLESPDRCTLEVSFEDVEKYDQNLAT 71
            |::.|.:.|.:|     |::||. ...|.|...:....:.:...::.:|.|::|::...:..||.
Zfish   170 VREWVSMAAPRLEIYHRFKNFLRTHVDEHGHNVFKERISDMCKENKESLLVNYEELASREHVLAY 234

  Fly    72 AIIE---EYYHIYPFLCQSV--SNYVK-DRIGLKTQKDCYVAFTEVPTRHKVRDLTTSKIGTLIR 130
            .:.|   |...|:....:.|  :.|.| |||.    .:.:|....:|...::|.|....:..|||
Zfish   235 FLPEAPAEMLKIFDEAAKEVVLAMYPKYDRIA----HEIHVRIGNLPLVEELRSLRQLHLNQLIR 295

  Fly   131 ISGQVVRTHPVHPELVSGVFMCLDCQTEI----RNVEQQFKFTNPTICRNPVCSNRKRFMLDVEK 191
            .||.|.....|.|:|....:.|..|...:    ::..|:.|   |..|  |.|.:...|.:::|:
Zfish   296 TSGVVTSCTGVLPQLGMVKYNCNKCNFILGPFFQSQNQEVK---PGSC--PECQSLGPFEINMEQ 355

  Fly   192 SLFLDFQKIRIQETQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTLIVVPDVSVLAGVGT 256
            :::.::|:|.|||:..::..|.:||:.:.||.::||:..:.||..:.||..              
Zfish   356 TVYQNYQRITIQESPGKVAAGRLPRSKDAILLADLVDMCKPGDEIELTGIY-------------- 406

  Fly   257 RAENSSRHKPGEGMDGVTGLKALGMRELNYRMAF--LACSVQATTARFGGTDLPMSEVTAEDMKK 319
                   |...:|             .||....|  .|..:.|.........:.::|:|.||:| 
Zfish   407 -------HNNYDG-------------SLNMANGFPVFATVILANHIARKDEGVAVAELTDEDVK- 450

  Fly   320 QMTDAEWHKIYEMSKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGVAKTTTEKTSLRGDINV 384
                    .|..:|||..:.:.:.:|:.||||.::::|||:.|..|||.||....|..:||||||
Zfish   451 --------AIVALSKDERIGERIFASIGPSIYAHEDIKRGLALALFGGEAKNPGGKHKVRGDINV 507

  Fly   385 CIVGDPSTAKSQFLKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGIC 449
            .:.|||.||||||||.|...:.||::|:|:.:||.||||.|.|...|.::.:|||||:|||.|:|
Zfish   508 LLCGDPGTAKSQFLKYVEKVASRAVFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGVC 572

  Fly   450 CIDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANPINGRYDRSKSLQQNIQL 514
            .|||||||:.:|:.:||||||||:|||::||:..:|.||.:::||||||.||||.|.:..:|:.|
Zfish   573 LIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTFSENVDL 637

  Fly   515 SAPIMSRFDLFFILVDECNEVVDYAIARKIVDLH-----SNIEESVERAYTREEVL--------- 565
            :.||:||||:..::.|..:.|.|..:||.:|..|     ||.|..|  |...|.||         
Zfish   638 TEPIISRFDVLCVVRDTVDPVQDEMLARFVVGSHIKHHPSNKEGGV--AGLEEVVLPNTFDVPPI 700

  Fly   566 ------RYVTFARQ-FKPVISQEAGHMLVENYGHLRQRDTGTSGRSTWRITVRQLESMIRLSEAM 623
                  :|:.:|:: .:|.::|.....:...|..||:....|   .:..||||.:|||||::||.
Zfish   701 PQELLRKYIIYAKERVRPKLNQMDQDKVARIYSDLRKESMAT---GSIPITVRHIESMIRMAEAH 762

  Fly   624 AKLECSNRVLERHVKEAFRLLNKSIIRVEQ 653
            |::...:.|||..|..|.|::.:|.|..::
Zfish   763 ARMHLRDYVLEDDVNMAIRVMLESFIDTQK 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 22..109 CDD:464206 21/98 (21%)
MCM 113..649 CDD:475121 194/562 (35%)
MCM6_C 702..816 CDD:465688
mcm2NP_775364.2 MCM2_N 57..170 CDD:403724 220/680 (32%)
MCM_N 185..273 CDD:464206 20/91 (22%)
MCM 279..788 CDD:214631 194/561 (35%)
Blue background indicates that the domain is not in the aligned region.

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