DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm6 and mcm-6

DIOPT Version :9

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_001023011.1 Gene:mcm-6 / 176385 WormBaseID:WBGene00003158 Length:810 Species:Caenorhabditis elegans


Alignment Length:820 Identity:430/820 - (52%)
Similarity:566/820 - (69%) Gaps:38/820 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RVKDEVGIRAQKLFQDFLEEFKED-GEIKYTRPAASLESPDRCTLEVSFEDVEKYDQNLATAIIE 75
            :|:|..|.|.|..|..||:.||:. .|..|......|..|::.|:.::.:.:.|:..||||.|..
 Worm    11 QVEDTDGTRVQNEFSKFLKSFKDQKNEFIYKSAMKELVQPEKNTIFINMQHLYKFSNNLATTIEL 75

  Fly    76 EYYHIYPFLCQSVSNYVKDRIGLKT-----QKDCYVAFTEVPTRHKVRDLTTSKIGTLIRISGQV 135
            :||.:|||:|:::.....|......     :|..||:...:..:.|||:|:..|:|.|:||:||:
 Worm    76 QYYRVYPFMCEALHLATLDACDESERQQMFKKQLYVSLFNLDAKTKVRELSADKVGGLVRIAGQI 140

  Fly   136 VRTHPVHPELVSGVFMCLDCQTEIRNVEQQFKFTNPTICRNPVCSNRKRFMLDVEKSLFLDFQKI 200
            ||||||||||....|:|.||....|:|:|||::|.||.|.||.|.||.||.|||..|.|:|||||
 Worm   141 VRTHPVHPELSRACFVCEDCGVTTRDVQQQFRYTQPTKCANPQCMNRTRFSLDVNSSTFVDFQKI 205

  Fly   201 RIQETQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTLIVVPDVSVLAGVGTRAE--NSSR 263
            ||||||||||||.|||.|::|:|.|:|||||.||:.|..|||||:||::.|:..|.|||  |.:|
 Worm   206 RIQETQAELPRGSIPRTVDVIVRGEMVETVQPGDKCDIVGTLIVIPDIAQLSTPGLRAETSNQNR 270

  Fly   264 HKPGEGMDGVTGLKALGMRELNYRMAFLACSVQATTARFGG-TDLPMSEVTAEDMKKQMTDAEWH 327
            .:..:..:|:|||||||:|:|.|:||||||.:|.|.:..|| ....:.|....|:..:|:..:..
 Worm   271 GRATDKSEGITGLKALGVRDLTYKMAFLACHIQQTESLVGGDASGAVEETDYLDLWSKMSTEDRA 335

  Fly   328 KIYEMSKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGVA-KTTTEKTSLRGDINVCIVGDPS 391
            .:.:||.|:.:.:|::.||||:||||.|||.|:||...|||| |:..|.||||||||||:|||||
 Worm   336 TLKKMSDDKKIEKNIVDSLFPNIYGNHEVKLGVLLMLLGGVAKKSRDEGTSLRGDINVCLVGDPS 400

  Fly   392 TAKSQFLKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGICCIDEFDK 456
            |||||.||.|.:|||||||||||||||||||||||:|||||:||||||||||||||:||||||||
 Worm   401 TAKSQVLKAVEEFSPRAIYTSGKASSAAGLTAAVVKDEESFEFVIEAGALMLADNGVCCIDEFDK 465

  Fly   457 MDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANPINGRYDRSKSLQQNIQLSAPIMSR 521
            ||.:||||||||||||||||.:|||:||||||.||||||||:|||||||:.|:.|:|:|||||||
 Worm   466 MDLKDQVAIHEAMEQQTISITKAGVKATLNARASILAAANPVNGRYDRSRPLKYNVQMSAPIMSR 530

  Fly   522 FDLFFILVDECNEVVDYAIARKIVDLHSNIEESVER--AYTREEVLRYVTFARQFKPVISQEAGH 584
            |||||:||||||||.||||||:|:|.|..|.|..||  .|..:::.:|:.|||.|||.||.:|..
 Worm   531 FDLFFVLVDECNEVTDYAIARRILDNHRAISEHTERDSVYKIDDIKKYIAFARCFKPKISDKAAE 595

  Fly   585 MLVENYGHLRQRDTGTSGRSTWRITVRQLESMIRLSEAMAKLECSNRVLERHVKEAFRLLNKSII 649
            .||..|..||..|:..:..|:||||||||||::|||||:|:|.|...||..||::|..||||||:
 Worm   596 TLVREYKKLRMSDSNNAATSSWRITVRQLESLVRLSEALARLHCGKEVLVEHVEKAAELLNKSIV 660

  Fly   650 RVEQPDIHLDDDEGLDMDDGIQ-HDIDMENNGAAANVDENNGMDTSASGAVQKKKFTLSFEDYKN 713
            |||||||.||||   |.|:.|. .:.|.||.....::|.:...:.:....:.|.|  :||::||.
 Worm   661 RVEQPDIALDDD---DFDNNIMVVEADKENQRGDDSMDHDGEKENAPKIDIAKLK--ISFKEYKQ 720

  Fly   714 LSTMLVLHMRAEEARCEVEGND--TGIKRSNVVTWYLEQVADQIESEDELISRKNLIEKLIDRLI 776
            ||.:||||||::|   :.:|.|  .|:|:|.:|.|||..:...:|:|::...:|.:.|::|.|||
 Worm   721 LSDVLVLHMRSDE---DNQGEDEYDGVKQSALVEWYLSTIEADLETEEDFNVQKTICERVIHRLI 782

  Fly   777 YHDQVIIPLKTSTLKPRIQVQKDFVEEDDPLLVVHPNYVV 816
            :.|.|::.::               :.:||.|.||||||:
 Worm   783 HQDHVLLEVE---------------QGEDPTLCVHPNYVI 807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 26/89 (29%)
MCM 113..649 CDD:214631 337/541 (62%)
MCM6_C 702..816 CDD:375690 41/115 (36%)
mcm-6NP_001023011.1 MCM_N 23..138 CDD:291233 35/114 (31%)
MCM 119..660 CDD:214631 337/540 (62%)
P-loop_NTPase <448..535 CDD:304359 72/86 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167032
Domainoid 1 1.000 344 1.000 Domainoid score I564
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 808 1.000 Inparanoid score I248
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53901
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 1 1.000 - - FOG0001226
OrthoInspector 1 1.000 - - oto17702
orthoMCL 1 0.900 - - OOG6_101983
Panther 1 1.100 - - LDO PTHR11630
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R696
SonicParanoid 1 1.000 - - X2150
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.940

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