DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm6 and Mcm5

DIOPT Version :9

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_001289469.1 Gene:Mcm5 / 17218 MGIID:103197 Length:734 Species:Mus musculus


Alignment Length:675 Identity:211/675 - (31%)
Similarity:340/675 - (50%) Gaps:77/675 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AQVGQLRVKDEVGIRAQKLFQDFLEEFKEDGE-----IKYTRPAASLESPDRCTLEVSFEDVEKY 65
            |:.||.| |.::    |:.|::||.:::...:     .||........:.....:||..||:..:
Mouse    21 AEEGQAR-KSQL----QRRFKEFLRQYRVGTDRTGFTFKYRDELKRHYNLGEYWIEVEMEDLASF 80

  Fly    66 DQNLATAIIEEYYHIYPF----LCQSVSNYVKDRI------GLKTQKDCYVAFTEVPTRHKVRDL 120
            |:.||     ::.|..|.    |.:..:..|.|.:      |.:..:|..|......:...:|.|
Mouse    81 DEELA-----DHLHKQPAEHLQLLEEAAKEVADEVTRPRPAGDELLQDIQVMLKSDASPSSIRIL 140

  Fly   121 TTSKIGTLIRISGQVVRTHPVHPELVSGVFMCLDCQTEIRNVEQQ---FKFTNPTICR-----NP 177
            .:..:..|::|.|.::....|..:.......|..|...:.|:..:   ..:..|..|.     .|
Mouse   141 KSDMMSHLVKIPGIIISASAVRAKATRISIQCRSCHNTLTNIAMRPGLEGYALPRKCNMDQAGRP 205

  Fly   178 VCSNRKRFMLDVEKSLFLDFQKIRIQETQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTL 242
            .|.....|::. :|...:|||.:::||....:|.|.:||.:::.....|.:.|..|:|       
Mouse   206 KCPLDPYFIMP-DKCKCVDFQTLKLQELPDAVPHGEMPRHMQLYCDRYLCDKVVPGNR------- 262

  Fly   243 IVVPDVSVLAGVGTRAENSSRHKPGEGMDGVTGLKALGMRELNYRMAFLACSVQATTARFGGTDL 307
            :.:..:..:...|.        .|.:|.|.|    .:|:|....|:..:......:...|.|:..
Mouse   263 VTIMGIYSIKKFGL--------NPSKGRDRV----GVGIRSSYIRVLGIQVDTDGSGRSFAGSVS 315

  Fly   308 PMSEVTAEDMKKQMTDAEWHKIYEMSKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGVAKTT 372
            |..|   |:.::            ::...|:|:.:..|:.|||:|..::|:.|....|||..|..
Mouse   316 PQEE---EEFRR------------LAALPNIYELISKSISPSIFGGMDMKKAIACLLFGGSRKRL 365

  Fly   373 TEKTSLRGDINVCIVGDPSTAKSQFLKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVIE 437
            .:..:.|||||:.::|||.|||||.||.|...||..:|||||.||||||||:|:||..|.:|::|
Mouse   366 PDGLTRRGDINLLMLGDPGTAKSQLLKFVEKCSPIGVYTSGKGSSAAGLTASVIRDPSSRNFIME 430

  Fly   438 AGALMLADNGICCIDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANPINGRY 502
            .||::|||.|:.||||||||.:.|:|||||||||||||||:||:..|||:|.|:|||||.:.||:
Mouse   431 GGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVFGRW 495

  Fly   503 DRSKSLQQNIQLSAPIMSRFDLFFILVDECNEVVDYAIARKIVDLHSNI---EESVERAYTREEV 564
            |.:|. :.||.....|:||||:.||:.||.||..|..:|:.::.||.:.   .::||......::
Mouse   496 DETKG-EDNIDFMPTILSRFDMIFIVKDEHNEERDMMLAKHVMTLHVSALTQTQAVEGEIDLAKM 559

  Fly   565 LRYVTFAR-QFKPVISQEAGHMLVENY----GHLRQRDTGTSGRSTWRITVRQLESMIRLSEAMA 624
            .:::.:.| :..|.:|.||...|...|    ...||.:..:..||:..|||||||:::|::||::
Mouse   560 KKFIAYCRARCGPRLSAEAAEKLKNRYIIMRSGARQHERDSDRRSSIPITVRQLEAIVRIAEALS 624

  Fly   625 KLECSNRVLERHVKEAFRLLNKSII 649
            |::......|..|:||.||...|.:
Mouse   625 KMKLQPFATEADVEEALRLFQVSTL 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 20/98 (20%)
MCM 113..649 CDD:214631 185/551 (34%)
MCM6_C 702..816 CDD:375690
Mcm5NP_001289469.1 MCM_N 35..130 CDD:379644 20/99 (20%)
MCM 133..649 CDD:214631 185/551 (34%)
Arginine finger 512..515 2/2 (100%)
BREX_BrxC <618..>730 CDD:380283 11/32 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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