DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm6 and mcm8

DIOPT Version :9

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:XP_002665161.2 Gene:mcm8 / 100333576 ZFINID:ZDB-GENE-120927-1 Length:852 Species:Danio rerio


Alignment Length:802 Identity:228/802 - (28%)
Similarity:362/802 - (45%) Gaps:166/802 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KDEVGIRAQKLFQDFLEEFKEDGEIKYTRP--AASL-ESPDR---C---------TLEVSFEDVE 63
            |||:. |...:..|: ::...:.::.::.|  |..| |.|::   |         ||::.....|
Zfish   124 KDEIE-RKGSILVDY-KDLLSNKQVSHSLPDLARDLKEMPEKILDCLGVAIHQVLTLDLERHAAE 186

  Fly    64 KYDQNLATAIIEEYYHIYPFLCQSVSNYVKDRIGLKTQKDCYVAFTEVPTRHKVRDLTTSKIGTL 128
            ...|....|.|....:| |.:...:.||                  |..|  .::.|..:..|..
Zfish   187 LQGQEELPAGIRPIINI-PHISARLYNY------------------EPLT--PLKSLRANLYGKF 230

  Fly   129 IRISGQVVRTHPVHPELVSGVFMCLDCQTEIRNVEQQFKFTNPTICRNPVCSNR-------KRFM 186
            :.|.|.|||...:.|..:...|:|..|...........|:|.||.|....|..|       ..|.
Zfish   231 VVIRGTVVRVSNIKPLCMKLAFVCNSCGDTQSVTLPDGKYTMPTKCLQSECRGRSFTPNRSSPFT 295

  Fly   187 LDVEKSLFLDFQKIRIQETQA--ELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTLIVVPDVS 249
            |.|      |:|.|::||..:  :...|.|||.:|..|..:||::...||....||.:.|     
Zfish   296 LTV------DWQTIKVQELMSGDQRESGRIPRTIECELTQDLVDSCVPGDMVTITGVIKV----- 349

  Fly   250 VLAGVGTRAENSSRHKPGEGMDGVTGLKALGMRELNYRMAFLACSVQATTARFGGTDLPMSEVTA 314
                  :..|.|:|:|..:.|               :.:...|.||..:.   |.....:||...
Zfish   350 ------SNEEGSTRNKKDKCM---------------FLLYIQANSVSNSK---GQKSKAVSESEG 390

  Fly   315 EDMKKQMTDAEWHKIYEMSKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGVAKTTTEKT--S 377
            :....:.:..:.:.|.|:....:|::.:::||.|.|||:..||.|:.|..|||..|...:|.  .
Zfish   391 QGPSVEFSIKDLYAIQEIQAQEDLFKLIVNSLCPVIYGHLLVKAGLALALFGGCQKYVDDKNRIP 455

  Fly   378 LRGDINVCIVGDPSTAKSQFLKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVIEAGALM 442
            :|||.::.|||||...|||.|:.|.:.:||.:|..|..::.:|||.::.||..|.|:.:|||||:
Zfish   456 IRGDPHMLIVGDPGLGKSQMLQAVCNVAPRGVYVCGNTTTTSGLTVSLSRDSGSGDYALEAGALV 520

  Fly   443 LADNGICCIDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANPINGRYDRSKS 507
            |.|.|||||||||||..:.| |:.||||||:||:|:||:..||.|||||:|||||:.|.|::.|:
Zfish   521 LGDQGICCIDEFDKMGSQHQ-ALLEAMEQQSISLAKAGIVCTLPARTSIIAAANPVGGHYNKGKT 584

  Fly   508 LQQNIQLSAPIMSRFDLFFILVDECNEVVDYAIARKIVDLHSNIEESVE-RAYTR---------- 561
            :.:|:::.:.::|||||.|||:|..||..|:.::..::.:.:....:|. .|.||          
Zfish   585 VSENLKMGSALLSRFDLVFILLDTPNEDHDHLLSEHVMAMRAGKSGAVSGAAATRFNTHESSISI 649

  Fly   562 -------------------------EEVLR-YVTFARQF-KPVISQEAGHMLVENYGHLR-QRDT 598
                                     .::|| ||.:||.: .|.:|.||..:|.:.|..|| |..|
Zfish   650 LEVSSEKPLADTLKLVPGEAFDPIPHQLLRKYVGYARHYVHPTLSAEAAQVLQDFYLELRKQNQT 714

  Fly   599 GTSGRSTWRITVRQLESMIRLSEAMAKLECSNRVLERHVKEAFRLLNKSIIRVEQPDIHLDDDEG 663
            ..|    ..||.|||||:|||:||.|::|...:..:...::...::..|:     .|.:.|:...
Zfish   715 ADS----TPITTRQLESLIRLTEARARVELREKATQSDAEDVVEIMKHSL-----TDTYSDEFGR 770

  Fly   664 LDMDDGIQHDIDMENNGAAANVDENNGMDTSASGAVQKKKFT-----LSFEDYKNLSTMLVLHMR 723
            ||.|                    .:.:.:..|...:.|||.     |:....|::..:..|...
Zfish   771 LDFD--------------------RSQLGSGMSNRSKVKKFVSALNKLAERTSKSMFELQDLRQL 815

  Fly   724 AEEARCEV---EG-----NDTG 737
            |::.:.:|   ||     |:.|
Zfish   816 AKDLQIQVVDFEGFICALNEQG 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 17/98 (17%)
MCM 113..649 CDD:214631 188/585 (32%)
MCM6_C 702..816 CDD:375690 12/49 (24%)
mcm8XP_002665161.2 Mcm2 110..801 CDD:224162 220/764 (29%)
MCM_N 111..235 CDD:291233 26/133 (20%)
AAA 451..605 CDD:99707 78/154 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 1 1.000 - - FOG0001226
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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