DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm6 and mcm3l

DIOPT Version :9

Sequence 1:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_001164539.1 Gene:mcm3l / 100147915 ZFINID:ZDB-GENE-040121-2 Length:807 Species:Danio rerio


Alignment Length:865 Identity:243/865 - (28%)
Similarity:385/865 - (44%) Gaps:180/865 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 AQKLFQDFLEEFKEDGEIKYTRPAASLESPDRCTLEVSFEDVEKYDQNLATAIIEEYYHIYPFLC 85
            :|:.:.|||::.::.|  .|.....|:.|..:|.|.|:..|:.:..:..|..:::..:.......
Zfish    13 SQREYLDFLDDDQDQG--IYHEKVRSMVSDGQCRLIVNINDLRRKSEKRAKELLKNAFAELVAFQ 75

  Fly    86 QSVSNYVK--DRIGLKTQKDCYVAFT-EVPTRH-KVRDLTTSKIGTLIRISGQVVRTHPVHPELV 146
            :::.:.|.  |....|..::.:|.|. ....:| ..|.|:...:|.|:.:.|.|.:...|.|:::
Zfish    76 KALKDLVASIDATYAKQFEEFHVGFEGSFGNKHVSPRTLSARFLGNLVCVEGIVTKCSLVRPKIM 140

  Fly   147 SGVFMCLDCQTEIRNVEQQFKFTN-------PTICRNPVCSNRKRFMLDVEKSL--FLDFQKIRI 202
            ..|..|...:..:..     |:|:       |:....|. .:.:...|:.|..|  :.|.|.:.|
Zfish   141 RSVHYCPATKKTLER-----KYTDLTSLDAFPSSAIYPT-KDEENNPLETEFGLCCYKDHQTLTI 199

  Fly   203 QETQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTLIVVPDVSVLAGVGTRAENSSRHKPG 267
            ||...:.|.|.:||:|:||...:||:.|:.|||....|....:|                     
Zfish   200 QEMPEKAPAGQLPRSVDIIANDDLVDRVKPGDRVQIVGVYRCLP--------------------- 243

  Fly   268 EGMDGVTGLKALGMRELNYRMAFLACSVQATTAR----FGGTDLPMSEVTAEDMKKQMTDAEWHK 328
                    .|..|.....:|...||.:|:..:..    |.|.|:.                   |
Zfish   244 --------AKQGGFTSGTFRTILLANNVKLMSKEIVPTFSGDDVA-------------------K 281

  Fly   329 IYEMSK--DRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGVAKTTTEKTSLRGDINVCIVGDPS 391
            |.:..|  .:::::.|..||.|||:|::.:|:.||....||........|.:|||||:.::||||
Zfish   282 IKKFCKAHSKDVFEQLSRSLAPSIHGHEYIKKAILCLLLGGNETNLENGTRIRGDINILLIGDPS 346

  Fly   392 TAKSQFLKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGICCIDEFDK 456
            .||||.|:.|...:||||.|:|:.||..||||||..|:|:.:..:||||::|||.|:.|||||||
Zfish   347 VAKSQLLRYVLFTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDK 411

  Fly   457 MDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANPINGRYDRSKSLQQNIQLSAPIMSR 521
            |...|:.||||.|||..::|::||::|.||||.|:||||||:.||||:.|:..:||.|...::||
Zfish   412 MSDMDRTAIHEVMEQGRVTISKAGIQARLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSR 476

  Fly   522 FDLFFILVDECNEVVDYAIARKIVDLH--------------------------SNIEESV----- 555
            |||.||::|:.:...|..|:..::.:|                          .||.|:.     
Zfish   477 FDLLFIVLDQMDPDSDKEISEHVLRMHRYRAPGEAEGTAMPLGSTVDVFATEDPNITEASEQELQ 541

  Fly   556 ----------------ERAYTREEVLRYVTFARQFKPVISQEAGHMLVENYGHLRQRD-TGTSGR 603
                            |:..|.|.:.:|:..|:..|||::|||...:.|.|..||..| ..:...
Zfish   542 IYEKKDNVLHGHRKKREKIVTMEFIRKYIHVAKLVKPVLTQEASDYIAEEYSRLRSHDQVNSDSA 606

  Fly   604 STWRITVRQLESMIRLSEAMAKLECSNRVLERHVKEAFRLLN----KSII-----RVEQPDIHLD 659
            .|..:|.|.||:|||||.|.||...|..|.....:.|..|:.    |.|:     |....|..:|
Zfish   607 RTMPVTARALETMIRLSTAHAKARMSKTVDLADAEAALELMQFAYFKKILEKVKKRKVPEDSEID 671

  Fly   660 DDEGLDMD-------------DGIQHDIDMENNGAAAN-----VDENNGMDTSASGA----VQKK 702
            ..:..:.|             ||  .|::|..:|...:     .|||......:..|    .|:|
Zfish   672 VSQSQETDSQRSLRKRSRISKDG--DDVEMTQDGEDEDPYDFTEDENTQPSQKSRPASQRSSQRK 734

  Fly   703 KFTLSFEDYKNLSTMLVLHMRAEEARCEVEGNDTGIKRSNVVTWYLEQVADQI----ESEDELIS 763
            |..:|.|.:|...|.||              |...:.||..|.     |:|.:    :.:||...
Zfish   735 KTDISQERFKTFKTALV--------------NAFKVTRSQSVA-----VSDLLTHINQGQDEEFD 780

  Fly   764 RKNLIEKLIDRLIYHDQVII 783
             :|.|..|::.:...:||::
Zfish   781 -QNEINLLLECMQDDNQVMV 799

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 16/85 (19%)
MCM 113..649 CDD:214631 189/603 (31%)
MCM6_C 702..816 CDD:375690 21/86 (24%)
mcm3lNP_001164539.1 MCM_N 29..127 CDD:291233 18/97 (19%)
MCM 107..652 CDD:214631 188/598 (31%)
P-loop_NTPase 338..477 CDD:304359 75/138 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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