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Protein Alignment Ctr1A and Slc31a1

DIOPT Version :10

Sequence 1:	NP_001245552.1	Gene:	Ctr1A / 31601	FlyBaseID:	FBgn0062413	Length:	241	Species:	Drosophila melanogaster
Sequence 2:	NP_780299.2	Gene:	Slc31a1 / 20529	MGIID:	1333843	Length:	196	Species:	Mus musculus

Alignment Length:	248	Identity:	96/248 - (38%)
Similarity:	125/248 - (50%)	Gaps:	59/248 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MDHAHHSAPGVDHSMHHDHVGMHHDHSGIPAATASPMDAASMFDLIPDTSDLQASHAGHAAHGAH 65
            |:|.     |::|...|.|:||:|....|   |..|                   |.......:|
Mouse     1 MNHM-----GMNHMEMHHHMGMNHTDDNI---TMPP-------------------HHHPTTSASH 38

  Fly    66 NHGGGSGTGMEHMMPMAFHFGY-NETILFSWWHIETVAGLIGSMIAIFLLALMYEGLKYYREYLF 129
            :||||...   .||||.|:|.: |..:|||...|.|...:.|:.:|:||||:.|||||..||.|.
Mouse    39 SHGGGDSM---MMMPMTFYFDFKNVNLLFSGLVINTPGEMAGAFVAVFLLAMFYEGLKIAREGLL 100

  Fly   130 WKTYNLLEYR--PVTGPQRNPEAPRIPSPAAAAPSPVQYVGEVV---HKQ-PPSMLSINHLLQTL 188
            .|:...:.|.  ||.||.                      |.::   ||. ...|||..|||||:
Mouse   101 RKSQVSIRYNSMPVPGPN----------------------GTILMETHKTVGQQMLSFPHLLQTV 143

  Fly   189 LHVLQVTLSFLLMLIFMTYNVWLCLMVVLGAAVGYFLFCWKKSVIVDVTEHCH 241
            ||::||.:|:.|||||||||.:||:.|..||..|||||.|||:|:||:|||||
Mouse   144 LHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLFSWKKAVVVDITEHCH 196

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.