DRSC/TRiP Functional Genomics Resources

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Protein Alignment pigs and Gas2l1

DIOPT Version :10

Sequence 1:NP_572331.2 Gene:pigs / 31596 FlyBaseID:FBgn0029881 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_653146.1 Gene:Gas2l1 / 78926 MGIID:1926176 Length:678 Species:Mus musculus


Alignment Length:817 Identity:254/817 - (31%)
Similarity:354/817 - (43%) Gaps:202/817 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ARPYRPFKSSEEYLEAMREDLAEWLSTLYP-ELSINADNFMDRLDTGVALCKHANYVRQAAVDYL 69
            |:..|||:|||.|:|||:||||:||:.||. .|..:.|.|:..|.||..||:|||.|.:||....
Mouse    13 AKSVRPFRSSEAYVEAMKEDLADWLNALYSLGLPGSGDGFLTGLATGTTLCQHANAVTEAARALA 77

  Fly    70 ARRQARNKSMTRSMTSGLAGPILAMGNVHYLPAAKSGTFFARDNVSNFITWCRKSLKIIECLLFE 134
            |.|..|                   |......:...|:|.|||||::||.|||..|.:.|.|:||
Mouse    78 AARPTR-------------------GVAFQAHSVAPGSFMARDNVASFIGWCRAELGVPEVLMFE 123

  Fly   135 TDDLIMRKNEKHVILCLLEVARRGAKFGMLAPMLVQMERQIDREIAADIKANGAGCSENGTQTDA 199
            |:||::|||||.|:|||||||||||:.|:|||.|||.|::|:||:.|..:.:....:|.    |.
Mouse   124 TEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRATPQVSSVPAAEE----DV 184

  Fly   200 LETGNSSAATMTTITTTTVETDLYDDSDDSETEDDGDQNPVLMYGPQPQIITNDLKSLDEMVRDL 264
            .|     .||:..:.|.|                             |::..|||::|||:||::
Mouse   185 TE-----IATVPGVPTRT-----------------------------PRMTPNDLRNLDELVREI 215

  Fly   265 VEKCTCPSQFPMVRVSEGKYRIGDTKVLIFVRILRSHVMVRVGGGWDTLSHYLDKHDPCRCRAQH 329
            :.:||||.||||::|||||||:||:.:|||||:||||||||||||||||.|||||||||||    
Mouse   216 LGRCTCPDQFPMIKVSEGKYRVGDSSLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRC---- 276

  Fly   330 RSSVAARLIPRQSPNHNPSNGIELHKAQVIFERSPPAARRVFNSPNCNGGPGTGSSCGTGVVGVA 394
             ||...||..:::...:|..|            ||..:.|       .|.|..||...:.  ...
Mouse   277 -SSSTHRLPQQRTGTFSPQRG------------SPTPSPR-------PGSPVPGSERRSS--RPE 319

  Fly   395 VPPTLQNGHSLSPNSGKYRSRS---PTPQRKFLNQQANGGGIASATGSSQTVTTDTSSGQLLGSP 456
            |.|....|....|.: ..|.|.   |.|:.:..:..::....::.:|.....:.|:::|.....|
Mouse   320 VTPISLRGTKEGPET-PLRPRDQLPPLPRSRRYSGDSDSSASSAQSGPMGARSDDSATGSRRERP 383

  Fly   457 SLARRSMSP-SPRRLIDMRKKQSSLDSYSSG-PKSLPG---------------YSCSMEEA---- 500
            |....|..| ||||  ....:..|.|....| |:..||               .|.|.||.    
Mouse   384 SHRPTSCLPASPRR--PTAPRSQSRDRLDRGRPRVAPGGRGAQLSTSSPARRTRSQSREEQAVLM 446

  Fly   501 ----NGGSGVGSAAGGVSSGSAGSGVAGEQ------GGANKFENISDNGSEISDEG---YRSLGV 552
                ..|.....|.|....||.|||.:..|      ..|.:.......|.|::...   :|:  .
Mouse   447 VRRDRDGQHSWVARGRGGGGSGGSGRSTPQTPRALSPAAPRPSRGPSPGPELAATPASIFRT--P 509

  Fly   553 IQSGAQKRESLHSQASIEDAESNAR-LDQTSSDSQI-SPSDEPAEKATTDILEEEDLNGQDREED 615
            :|...|:.:.|..:.. |:..:||| |:..:|.:.: |..|.||                     
Mouse   510 LQLDPQQEQQLFRRLE-EEFLANARALEAAASHTPMGSAPDPPA--------------------- 552

  Fly   616 QEDYSVCDGPQSLPAILSGAHKLSDKFEQSGVFITDDEITVDIAKTEDQSVANTMGNPTPNLSKI 680
             .|.:.|....|    .|....|..|..|.|               |....||  |.|.|     
Mouse   553 -PDSAYCSSSSS----SSSLSVLGGKCGQPG---------------ESGRTAN--GLPGP----- 590

  Fly   681 PRSPLAQRRRRSIDNSTCGGA-----GGSLQDLSSRSGLPAPAFSRKQPVYRSVRTRNSTGATTT 740
                    |.:::.:|:..|:     ||:|.  ::||.|..|     :|.....|.|..|.....
Mouse   591 --------RSQALSSSSDEGSPYLAVGGALD--ATRSSLAGP-----EPSLTWARGRMDTQPDRK 640

  Fly   741 P--VAPPRSRQATQLPMVRDVTNTWSGRTTGAPKRRP 775
            |  :..||..:....|:   ....|..:.:..|:..|
Mouse   641 PSRIPTPRGPRRPSGPI---ELGAWHAQHSVTPRTEP 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pigsNP_572331.2 CH_GAS2L1_2 11..163 CDD:409117 72/152 (47%)
GAS2 257..325 CDD:460480 52/67 (78%)
Gas2l1NP_653146.1 CH_GAS2L1_2 18..152 CDD:409117 72/152 (47%)
GAS2 208..276 CDD:460480 52/67 (78%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 276..524 59/278 (21%)
PHA03247 <292..657 CDD:223021 95/454 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 538..678 40/203 (20%)

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