DRSC/TRiP Functional Genomics Resources

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Protein Alignment pigs and Dstl1

DIOPT Version :10

Sequence 1:NP_572331.2 Gene:pigs / 31596 FlyBaseID:FBgn0029881 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_002729884.2 Gene:Dstl1 / 680875 RGDID:1587008 Length:772 Species:Rattus norvegicus


Alignment Length:264 Identity:54/264 - (20%)
Similarity:84/264 - (31%) Gaps:65/264 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 KFGMLAPMLVQMERQIDREIAADIKANGAGC---------SENGTQTDALETGNSSAATMTTITT 215
            |:...||..:...|.:|:....|:.:....|         |......:.:|..|......:  ..
  Rat   516 KYWTQAPREILALRSLDQGPPGDLGSRAKACLLGKIPEELSWRPWWAEVMENWNHRKPEHS--KR 578

  Fly   216 TTVETDLYDDSDDSETEDD--------GDQNPVLM---------YGPQPQIITNDLKSLDEMVRD 263
            ...|.|.::..:....|.|        |:|..:..         .||..:..|.....|....:.
  Rat   579 NQEERDEWEQLEQGHQEQDLMESFLAAGEQGNIGQGWPGCNWGRCGPHHKFSTTFEPGLSSAQKQ 643

  Fly   264 LVEKCTCPSQFPMVRVSEG---KYRIGDTKVLIFVRILRSHVMVRVGGGWDTLSHYLDKHDPCRC 325
                   ||.....|.:||   ....|..||. ...|.|..:||||||||..|..:|.|:||.|.
  Rat   644 -------PSSVVRARNTEGTSTPVARGRPKVQ-GALIARGAMMVRVGGGWAALDEFLVKNDPVRA 700

  Fly   326 RAQHRSSVAARLI--------PR-------------QSPNHNPSNGIELHKAQVIFERSPPAARR 369
            :.:....:..|.:        |.             .|...:|..|:.:.|     |...|::.:
  Rat   701 KGRTSQKIHERFLCWTPSVPAPEVITLRLWTSIRMGSSRPQSPKTGLPIGK-----EHRDPSSYK 760

  Fly   370 VFNS 373
            |..|
  Rat   761 VKTS 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pigsNP_572331.2 CH_GAS2L1_2 11..163 CDD:409117 1/2 (50%)
GAS2 257..325 CDD:460480 24/70 (34%)
Dstl1XP_002729884.2 COG4913 <196..>383 CDD:443941
GAS2 <672..702 CDD:470602 16/29 (55%)
Blue background indicates that the domain is not in the aligned region.

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