Protein Alignment pigs and Plec

DIOPT Version :9

• Sequence 1: NP_001245550.1
• Gene: pigs / 31596
• FlyBaseID: FBgn0029881
• Length: 977
• Species: Drosophila melanogaster
• Sequence 2: XP_017450571.1
• Gene: Plec / 64204
• RGDID: 621649
• Length: 4704
• Species: Rattus norvegicus
• Alignment Length: 806
• Identity: 164/806 - (20%)
• Similarity: 267/806 - (33%)
• Gaps: 267/806 - (33%)

  Fly    18 YLEAMREDLAEWLSTLYPELSINADNFMDRLDTGVALCKHANYVRQAAVDYLARRQARNKSM--T 80
            |||..:|.:     |:|..:.    ..:.|..|...|.:     .|||..:|. ...||:.:  .
  Rat  3518 YLEDSKEKV-----TIYEAMR----RGLLRPSTATLLLE-----AQAATGFLV-DPVRNQRLYVH 3567

  Fly    81 RSMTSGLAGPILAMGNVHYLPAAKSGTFFARDNVSNFITWCRKSLKIIECLLFETDDLIMRKNEK 145
            .::.:|:.||.|   :...|.|.|:.|.: :|..|.      .::.:.:.:   ...|::|   .
  Rat  3568 EAVKAGVVGPEL---HEKLLSAEKAVTGY-KDPYSG------STISLFQAM---KKGLVLR---D 3616

  Fly   146 HVILCLLEVARRGAKFGMLAPM--------LVQMERQIDRE---IAADIKANGAG-----CSENG 194
            |.|. |||.  :.|..|::.|:        :.......|.|   :.||...:..|     ..||.
  Rat  3617 HAIR-LLEA--QIATGGIIDPVHSHRLPVDVAYQRGYFDEEMNRVLADPSDDTKGFFDPNTHENL 3678

  Fly   195 TQTDAL-------ETGNSSAATMTTITTTTVE-TDLYDDSDD----SETEDD-------GDQNPV 240
            |....|       |||...........|..|| |.:|.:.:.    .||:.|       |..:..
  Rat  3679 TYLQLLERCVEDPETGLRLLPLRGAEKTEVVETTQVYTEEETRRAFEETQIDIPGGGSHGGSSMS 3743

  Fly   241 LMYGPQPQIITNDLKSLDEMVRDLVEKCTCPSQFPMVRVSEGKYRIGDTKVLIFVRILRSHVMVR 305
            |.     :::.:|:...|:..|.:.:       |...||::      :..::|.:.|:....::|
  Rat  3744 LW-----EVMQSDMIPEDQRARLMAD-------FQAGRVTK------ERMIIIIIEIIEKTEIIR 3790

  Fly   306 VGGGWDTLSHYLDKHDPCRCRAQHRSSVAARLIPRQSPNHNPSNGIELHKAQVIFERSPPAARRV 370
                    ...|..:|..|.|........||:|..::.|              :|.....:.|.|
  Rat  3791 --------QQNLASYDYVRRRLTAEDLYEARIISLETYN--------------LFREGTKSLREV 3833

  Fly   371 FNSPNC-NGGPGTGSSCGTGVVGVAVP---PTLQNGHSLSPNSGKYRSRSPTPQRKFLNQQANGG 431
            ....:. ....||||     |.||.:|   .||....:|     |....|....|..|..||
  Rat  3834 LEMESAWRYLYGTGS-----VAGVYLPGSRQTLTIYQAL-----KKGLLSAEVARLLLEAQA--- 3885

  Fly   432 GIASATG------SSQTVTTDTSSGQLLGSPSLARRSMSPSPRRLIDMRKKQSSLDSYSSGPKSL 490
                |||      ..:.:|.|.:..:.|..|.|..|.:| :.|.:...|      |.|:..|.||
  Rat  3886 ----ATGFLLDPVKGERLTVDEAVRKGLVGPELHDRLLS-AERAVTGYR------DPYTEQPISL 3939

  Fly   491 ---------PGYSCSMEEANGGSGVGSAAGGVSSGSAG----SGVAGEQGGANKFENISDNGSEI 542
                     |.     |||........|.||:.....|    ..||.::|..||
  Rat  3940 FQAMKKELIPA-----EEALRLLDAQLATGGIVDPRLGFHLPLEVAYQRGYLNK----------- 3988

  Fly   543 SDEGYRSLGVIQSGAQKRESLHSQASIEDAESNARLDQTSSDSQISPSDEPAEKATTDILEEEDL 607
                               ..|.|.| |.:|..:.:| .|:|.::|         .|.:|:
  Rat  3989 -------------------DTHDQLS-EPSEVRSYVD-PSTDERLS---------YTQLLK---- 4019

  Fly   608 NGQDREEDQEDYSVCDGPQSLPAILSGAHKLSDKFEQSGVFITDDEITVDIAKTEDQSVA----- 667
              :.|.:|.      .|...||  ||.|.||:  |......||.:|:.  .::..|::.|
  Rat  4020 --RCRRDDN------SGQMLLP--LSDARKLT--FRGLRKQITVEELV--RSQVMDEATALQLQE 4070

  Fly   668 --NTMGNPTPNLSKIPRSPLAQRRRRSIDNSTCGGAGGSLQDLSSRSGLPAPAFSRKQPVYRSVR 730
              .::...|.||.|.                        |:..|..:|:...|...:..||::::
  Rat  4071 GLTSIEEVTKNLQKF------------------------LEGTSCIAGVFVDATKERLSVYQAMK 4111

  Fly   731 --------------TRNSTGATTTPV 742
                          .:.:||....|:
  Rat  4112 KGIIRPGTAFELLEAQAATGYVIDPI 4137

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pigs	NP_001245550.1	CH	22..159	CDD:237981	29/138 (21%)
		GAS2	258..325	CDD:280367	10/66 (15%)
Plec	XP_017450571.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0516
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900