DRSC/TRiP Functional Genomics Resources

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Protein Alignment pigs and gas2l3

DIOPT Version :10

Sequence 1:NP_572331.2 Gene:pigs / 31596 FlyBaseID:FBgn0029881 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_073802527.1 Gene:gas2l3 / 566151 ZFINID:ZDB-GENE-030131-2560 Length:619 Species:Danio rerio


Alignment Length:561 Identity:143/561 - (25%)
Similarity:219/561 - (39%) Gaps:187/561 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EEYLEAMREDLAEWLSTLYPELSINADNFMDRLDTGVALCKHANYVRQAAVDYLARRQARNKSMT 80
            |..|..|:||||.|||.:..| .::|:.||:.||.||.||:....:             ::|...
Zfish   119 EATLVPMQEDLAIWLSGMLGE-QLSAERFMEELDNGVRLCRLVGIL-------------QSKIPE 169

  Fly    81 RSMTSGLAGPILAMGNVHYLPAAKSGTFFARDNVSNFITWCRKSLKIIECLLFETDDLIMRKNEK 145
            .|.|.      :....:.:...|..|:||||||.:||::||| .:.:.|..|||::.|::.|..:
Zfish   170 DSETP------MPSKKIQFKKNASPGSFFARDNTANFLSWCR-HIGVDETYLFESEGLVLHKEPR 227

  Fly   146 HVILCLLEVARRGAKFGMLAPMLVQMERQIDREIAADIKANGAGCSENGTQTDALETGNSSAATM 210
            .|.|||||:.|..:::|:..|:||::|::|:.|             |:...||       .::.:
Zfish   228 QVCLCLLEIGRIVSRYGIEPPVLVKLEKEIELE-------------ESMMMTD-------HSSPV 272

  Fly   211 TTITTTTVETDLYDDSDDSETEDDGDQNPVLMYGPQPQIITNDLKSLDEMVRDLVEKCTCPSQFP 275
            .|.|.......:|.       .|..||                    ||      ..|.|..:|.
Zfish   273 KTFTVCCQHGAMYH-------ADRADQ--------------------DE------PPCNCTQKFS 304

  Fly   276 MVRVSEGKYRIGDTKVLIFVRILR-SHVMVRVGGGWDTLSHYLDKHDPCR--------------- 324
            :..:|||:||:||.  ::|:|:|. .|||||||||||||..:|.|:||.|               
Zfish   305 IEYLSEGRYRLGDK--ILFIRMLHGKHVMVRVGGGWDTLKGFLLKYDPDRVLQFTTLEQKILAYQ 367

  Fly   325 -----CRAQHRSS----------VAARLIPRQSPNHNPSNGIELHKAQV------------IFER 362
                 ..:.|.|.          .|..|:|..|.:.:.|:...::|...            :..|
Zfish   368 KGPSSSGSTHSSQTAQPPTMDPIAAVNLLPESSSSSSSSSTTSVYKPSTPRSVTQSPASTPLIAR 432

  Fly   363 SPPAARRVFNSPNCNGGPGTGSSCGTGVVGVAVPPTLQNGHSLSPNSGKYRSRSPTPQRKFLNQQ 427
            ...|.:::||:|..:                  |.|       :|.|.....|||.||       
Zfish   433 KAAAPKKIFNTPTSS------------------PKT-------TPLSSPVPKRSPLPQ------- 465

  Fly   428 ANGGGIASATGSSQTVTTDTSSGQLLGSPSLARRSMSPSP---------------------RRLI 471
                  ::.:|.||.....|.. :..||||..|..:.|.|                     .|:.
Zfish   466 ------STLSGVSQKAVPKTKL-RPRGSPSQPRSPVCPEPTCKQPKSSAPSAQKPPAGPVRTRIA 523

  Fly   472 DMRKKQSSLDSYS--SG------PKSLPGYSCSMEEANGGS 504
            ..|....:|||..  ||      |.:.|....|:|::...|
Zfish   524 QRRPPSPALDSKKPCSGSPRAPIPLTKPSQGKSVEQSTTAS 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pigsNP_572331.2 CH_GAS2L1_2 11..163 CDD:409117 49/146 (34%)
GAS2 257..325 CDD:460480 33/88 (38%)
gas2l3XP_073802527.1 None

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