| Sequence 1: | NP_001245550.1 | Gene: | pigs / 31596 | FlyBaseID: | FBgn0029881 | Length: | 977 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001352259.1 | Gene: | syne2a / 559363 | ZFINID: | ZDB-GENE-041001-109 | Length: | 8865 | Species: | Danio rerio |
| Alignment Length: | 1028 | Identity: | 184/1028 - (17%) |
|---|---|---|---|
| Similarity: | 328/1028 - (31%) | Gaps: | 301/1028 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 123 KSLKIIECLLFETDDLIMR--------KNEKHV-------------ILCLLEVARRGAKFGML-- 164
Fly 165 ---APMLVQMERQIDREIAADIKANGAGCSENGTQTDALETGNSSAATMTTITTTTVETDLYDDS 226
Fly 227 DDSETEDDGDQNPVLMYGPQPQII---TNDLKSLDEMVR-----DLVEKCTCPSQFPMVRVSEG- 282
Fly 283 ---KYRIGDTKVLIFVRI-----------------LRSHVMVRVGGGWDTLSHYLDKHDPCRCRA 327
Fly 328 QHRSSVAARL-----IPRQSPNHNPSNGIELHKAQVIFERSPPAA---RRVFNSPNCNGGPGTGS 384
Fly 385 ------------SCGTGVVGVAVPPT-------------LQNGHSLSPNSGKYRSRSPTPQRKFL 424
Fly 425 N---QQANGGGIASATGSSQTVTTDTSSGQL-------LGSPSLARRSMSPSPRRLIDMRKKQSS 479
Fly 480 LDSYSSGPKSLPGYSCSMEEANGGSGVGSAAGGVSSGSAGSGVAGEQ---GGANKFENISDNGSE 541
Fly 542 ISDEGYRSLG-VIQSGAQKRESLHSQASIE-------DAESNARLDQTSSD-------------- 584
Fly 585 SQISPSDEPAEKATTDILEEEDLNGQDREEDQEDYSVCDGPQSLPAILSGAHKL---SDKFEQSG 646
Fly 647 VFI---TDDEITVDIAKTEDQSVANTMGNP--TPNLSKIPRSPLAQRRRRSIDN-------STCG 699
Fly 700 GAGGSLQD---LSSRSGLPAPAFSRKQPVYRSVRTRNSTGATTTPVAPPRSRQATQLPMV----- 756
Fly 757 ------------------------------RDVTNTW--SGRTTGAPKRRP-------------- 775
Fly 776 --------PCTADTFVAPTNGTGPAGSFERNGKGRSSQIL-------YDSNGRRVRSGAPGCTSS 825
Fly 826 LTTSPVKNHASSPLAQQLLEAASSAKNDAQILE---KMKSLLSRYAAGNQTKAGVGATATAANKI 887
Fly 888 NSNGKKTPVYEDFTTAWVHSNGNLERSESCSPPAKARSKRSSAASSCESNNSN 940 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| pigs | NP_001245550.1 | CH | 22..159 | CDD:237981 | 12/56 (21%) |
| GAS2 | 258..325 | CDD:280367 | 12/92 (13%) | ||
| syne2a | NP_001352259.1 | SAC6 | 27..>330 | CDD:227401 | |
| SMC_N | <1602..2305 | CDD:330553 | |||
| SMC_N | <5774..6100 | CDD:330553 | |||
| SMC_N | <6826..7606 | CDD:330553 | |||
| SPEC | 6982..7192 | CDD:238103 | |||
| SPEC | 7097..7308 | CDD:321951 | |||
| SPEC | 7564..7732 | CDD:238103 | |||
| SMC_N | 7709..>8039 | CDD:330553 | |||
| SPEC | 7954..8166 | CDD:238103 | |||
| SPEC | 8170..8380 | CDD:238103 | |||
| SPEC | 8563..8780 | CDD:238103 | |||
| KASH | <8836..8865 | CDD:313711 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E2759_KOG0516 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||