Protein Alignment pigs and clmnb

DIOPT Version :9

• Sequence 1: NP_001245550.1
• Gene: pigs / 31596
• FlyBaseID: FBgn0029881
• Length: 977
• Species: Drosophila melanogaster
• Sequence 2: NP_001003605.1
• Gene: clmnb / 445211
• ZFINID: ZDB-GENE-040801-124
• Length: 687
• Species: Danio rerio
• Alignment Length: 606
• Identity: 115/606 - (18%)
• Similarity: 198/606 - (32%)
• Gaps: 156/606 - (25%)

  Fly   346 NPSNGIELHKAQVIFERSPPAARRVFNSPN--------C---NGGPGTGSSCGTGVVGVAVPPTL 399
            :||..:.|....:::.:.....|.:..||:        |   :.|..:.:|.|..:.|     ||
Zfish   119 SPSAVLRLIWNIIVYYQIKQVTRSLEKSPSTFSLLSLPCDSDSSGRSSPASPGDDIFG-----TL 178

  Fly   400 QNGHSLSPNSGKYRSRSPTPQRKFLNQQANGGGIASATGSSQTVTT-------DTSSGQLLGSPS 457
                   |:.||         :...|.:..|..|.:....:|..|.       |.......|...
Zfish   179 -------PSKGK---------KSLKNLKYRGTAIKTLLSWAQNCTAKYGVEIRDFGKSWRSGLAF 227

  Fly   458 LA------------RRSMSPSPRRLID--MRKKQSSLD-----------SYSSGPKSLPGYSCSM 497
            :|            |:::|..||..::  .|..|..|.           .:|...:|:..|....
Zfish   228 VALVKFFCPEFVHMRKALSSEPRLNMETAFRAAQEWLGIPPLLNPDDVAVHSPDEQSIITYIAQF 292

  Fly   498 EEANGGSGVGSAAGGVSSGSAGSGVAGEQGGANKFENISDNG------SEISDEGYRSLGVIQSG 556
            .|...|....:.:...|.|:..|        ..:::.:|.:.      |.:|.|..|.|..:...
Zfish   293 LECCPGHDEDAMSTDSSRGTPNS--------TERWDRVSTDSDSCVFPSNVSTEALRDLYNLSET 349

  Fly   557 AQKRESLHS---------QASIED----AESNARLDQTSSDSQISPSDEPA-EKATTDILEEEDL 607
            :::.::.|:         |.:|.|    :||...:.:||:..|.  .|..| .|.....||::..
Zfish   350 SEEEQTYHTGDQESLSVCQENIRDLAARSESLLNVKKTSTGGQC--CDSIAWRKRWIGSLEDDGN 412

  Fly   608 NGQDREEDQEDYSVCDGPQ--SLPAILSGAHKLSDKFEQSGVFITDDEITVDIA-KTEDQSVANT 669
            ..:..:|.....||.|..:  :...||...||      .||:     |..:|.. .|...|.|..
Zfish   413 CSEVSKEAVYSLSVLDSDEEDAFSYILELDHK------DSGL-----ESNIDFGLNTVMDSQAVE 466

  Fly   670 MGNPTPNLSKIPRSPL------AQRRRRSIDNSTCGGAGGSLQDLSSRSGLPAPAFSRKQPVYRS 728
            ......::.:...|.:      |||..::.|.|...|.|.....::         ..:.:|...:
Zfish   467 FDLNVASIFETQESEIKYCCCEAQRNLKATDVSVRSGGGKCTNKIT---------LDQVRPTKSN 522

  Fly   729 VRTRNSTGATTTPVAPPRSRQATQLPMVRDVTNTWSGRTTGAP------KRRPPCTADTFVAPTN 787
            :.|.|:....|.|.:.........   :..:.|.:...|...|      |.:...:||.| ..:|
Zfish   523 ILTENNCDEKTLPASDTLLMNQNS---IEKIENNFKLYTDERPDLNCSLKMKESDSADAF-THSN 583

  Fly   788 GTGPAGSFERN----GKGRSSQIL------------YDSNGRRVRSGAPGCTSSLTTSPVKNHAS 836
            ||..|.....|    .|.|....|            |:.|....||...|    :|..|..:||.
Zfish   584 GTDDAFVHLDNCVDEDKLREELFLCPVKENLLDNDQYEQNNVLDRSVLDG----ITEEPAVSHAK 644

  Fly   837 SPLAQQLLEAASSAKNDAQIL 857
               .::.|:.||....:..:|
Zfish   645 ---RKEGLDQASYEVQELHML 662

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pigs	NP_001245550.1	CH	22..159	CDD:237981
		GAS2	258..325	CDD:280367
clmnb	NP_001003605.1	CH	29..130	CDD:278723	3/10 (30%)
		CH	197..292	CDD:278723	15/94 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0516
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900