DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pigs and GAS2L2

DIOPT Version :9

Sequence 1:NP_001245550.1 Gene:pigs / 31596 FlyBaseID:FBgn0029881 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_644814.1 Gene:GAS2L2 / 246176 HGNCID:24846 Length:880 Species:Homo sapiens


Alignment Length:1094 Identity:285/1094 - (26%)
Similarity:394/1094 - (36%) Gaps:445/1094 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RPFKSSEEYLEAMREDLAEWLSTLYPELSINADNFMDRLDTGVALCKHANYVRQAAVDYLARRQA 74
            |||||||:|||||:|||||||..|| .|.|:|.||:..|:||:.||:|||.|..||:.:||...|
Human    22 RPFKSSEQYLEAMKEDLAEWLRDLY-GLDIDAANFLQVLETGLVLCQHANVVTDAALAFLAEAPA 85

  Fly    75 RNKSMTRSMTSGLAGPILAMGNVHYLPAAKSGTFFARDNVSNFITWCRKSLKIIECLLFETDDLI 139
            :.:.:          |:..:| |....||:.|||.|||||||||.||||.:.|.|.|:|||:||:
Human    86 QAQKI----------PMPRVG-VSCNGAAQPGTFQARDNVSNFIQWCRKEMGIQEVLMFETEDLV 139

  Fly   140 MRKNEKHVILCLLEVARRGAKFGMLAPMLVQMERQIDREIAADIKANGAGCSENGTQTDALETGN 204
            :|||.|:|:|||||:.||..:||:.||.|||:|.:|:.|:..::               ||    
Human   140 LRKNVKNVVLCLLELGRRAWRFGVAAPTLVQLEEEIEEEVRREL---------------AL---- 185

  Fly   205 SSAATMTTITTTTVETDLYDDSDDSETEDDGDQNPVLMYGPQPQIITNDLKSLDEMVRDLVEKCT 269
                                        ...|.:|......||    ...::||:||:.||..||
Human   186 ----------------------------PPPDPSPPAPPRRQP----CHFRNLDQMVQSLVSHCT 218

  Fly   270 CPSQFPMVRVSEGKYRIGDTKVLIFVRILRSHVMVRVGGGWDTLSHYLDKHDPCRCRAQHRSSVA 334
            ||.||.||:|||||||:||:..|||:||||:|||||||||||||.|||||||||||         
Human   219 CPVQFSMVKVSEGKYRVGDSNTLIFIRILRNHVMVRVGGGWDTLGHYLDKHDPCRC--------- 274

  Fly   335 ARLIPRQSPNHNPSNGIELHKAQVIFERSPPAARRVFNSPNCNGGPGTGSSCGTGVVGVAVPPT- 398
                  .|.:|.|.:.::           |||                             ||. 
Human   275 ------TSLSHKPGSFLK-----------PPA-----------------------------PPVQ 293

  Fly   399 ----LQNGHS-LSPNSGKYRSRSPTPQRKFLNQQANGGGIASATGSSQTVTTDTSSGQLLGSPSL 458
                :|:|.| ..|.....||:||.|...:                    .|.|||.:.|..|: 
Human   294 HEVRVQDGPSQTQPTMTISRSQSPPPPVDW--------------------KTYTSSDRRLRPPT- 337

  Fly   459 ARRSMSPSPRRLIDMRKKQSSLDSYSSGPKSLPGYSCSMEEANGGSGVGSAAGGVSSGSAGSGVA 523
               ..||.|||                                             ...||:|.:
Human   338 ---PSSPRPRR---------------------------------------------ERGAGTGAS 354

  Fly   524 GEQGGANKFENISDNGSEISDEGYRSLGVIQSGAQKRESLHSQASIEDAESNARLDQTSSDSQIS 588
            .|.....:.:.             |||  |.|..|                     .|:.||..|
Human   355 REMAPFLRCQE-------------RSL--IPSWRQ---------------------PTAGDSPPS 383

  Fly   589 PSDEPAEKATTDILEEEDLNGQDRE-----EDQEDYSVCDGPQSLPAILSGAHKLSDKFEQSGVF 648
            |.....:|            |:|.:     :.:|.|     |..||.                  
Human   384 PQSSSTQK------------GRDPQCTSSGKREERY-----PPELPR------------------ 413

  Fly   649 ITDDEITVDIAKTEDQSVANTMGNPTPNLSKIPRSPLAQRRRRSIDNSTCGGAGGSLQDLSSRSG 713
               ..|.......|..|.....|||||            :|.|:|:.:|.|        :|:|..
Human   414 ---GRIPTSWVHEETDSWGTDAGNPTP------------QRLRAIEATTKG--------ISARGP 455

  Fly   714 LPAPA----------------------FSRKQPVYRSVRTRNST-GATTTPVAPPRSRQATQLPM 755
            .|.|.                      |..::|  .|||:.... |.|..|:..|.:|..|.   
Human   456 SPLPRSFGPAECLGLRLPLRDEAKGAFFQFREP--ESVRSPTPVQGLTKIPIRLPPARPPTP--- 515

  Fly   756 VRDVTNTWSGRTTGAPKR---RPP-----------------CTADT----------FVAPTNGTG 790
                ..::.|.|:|:|:.   |.|                 |:.:.          .:|....:.
Human   516 ----GRSFPGATSGSPRTELGRDPIPLRAVTVDLAGSTHGDCSVEVRQEDQQLDIQVMAEARESW 576

  Fly   791 PAGSFERNGK-------GRSSQILYDS-------NGR--RVRSGAPGCTSS--LTTSPV------ 831
            ..|..|:.|:       |...|.:|.|       |.:  .|||..|..|.|  :..|.|      
Human   577 DLGLQEQEGRYTPLPLGGNKEQAIYCSLEEEILGNMKLLEVRSACPQGTRSGVIPRSGVYIPRLA 641

  Fly   832 ---------KNHASSPLAQ----------QLLEAASSAKNDAQILE---KMKSLLSRYAAGNQTK 874
                     .:.|...|||          :..:||.:......:..   .:|..|....:|.:||
Human   642 GQWPEPGGPYDKAIQELAQGSPSLLKVDLEAWKAAPTGSPKPAVTPGPGSLKGKLGARQSGPRTK 706

  Fly   875 AGVGATATAANKINSNGKKTPVYEDFTTAWVHSNGNLERSESCSPPAKARSKRSSAASSCESNNS 939
            |.:.|..|...|:...|                      .:.||....:.|..:...|..:.|:.
Human   707 ASLSAKGTHMRKVPPQG----------------------GQDCSASTVSASPEAPTPSPLDPNSD 749

  Fly   940 NAGAGSGAAAGSASVVSPRR---------------------ERGMSKIPAPVRH 972
            .|.|  ..:.|..::..|:|                     |:..|:||.|:.:
Human   750 KAKA--CLSKGRRTLRKPKRVPSIYKLKLRPRIRPRRDHRPEKQPSRIPRPLAY 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pigsNP_001245550.1 CH 22..159 CDD:237981 70/136 (51%)
GAS2 258..325 CDD:280367 51/66 (77%)
GAS2L2NP_644814.1 CH 34..159 CDD:237981 70/136 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..200 4/66 (6%)
GAS2 207..274 CDD:280367 51/66 (77%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..360 29/185 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..437 20/123 (16%)
Interaction with ADORA2A. /evidence=ECO:0000250|UniProtKB:Q5SSG4 438..880 75/405 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 489..533 13/50 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 676..880 26/150 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 127 1.000 Domainoid score I5370
eggNOG 1 0.900 - - E2759_KOG0516
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1343422at2759
OrthoFinder 1 1.000 - - FOG0001647
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR46756
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3764
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
98.920

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