DRSC/TRiP Functional Genomics Resources

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Protein Alignment pigs and D2096.11

DIOPT Version :10

Sequence 1:NP_572331.2 Gene:pigs / 31596 FlyBaseID:FBgn0029881 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_001379846.1 Gene:D2096.11 / 177638 WormBaseID:WBGene00017078 Length:727 Species:Caenorhabditis elegans


Alignment Length:383 Identity:90/383 - (23%)
Similarity:153/383 - (39%) Gaps:89/383 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 MRKNEKHVILCLLEVARRGAKFGMLAPMLVQMERQIDREIAADIKA--------NGAGCSEN--- 193
            ::.:..|:...|.|:::..|.  ..:|.|:...:|:.::| ..:|.        .....||:   
 Worm   391 LQADADHIFKALEEISKDEAL--QESPSLLLDSKQVSKKI-EQLKVLLKPVEEKKDTFISESKLV 452

  Fly   194 ----GTQTDALETGNSSAATMTTITTTTVETDLYDDSDDSETEDDG------DQNPVLMYGPQPQ 248
                |.::||.|..:         ....|| |.|.|..:..::.:|      ..|.:.....:.:
 Worm   453 MKTVGPESDAKELDS---------LMKHVE-DAYSDVVELISDKEGLIDRCNASNRIAHPQTETE 507

  Fly   249 IITNDLKSLDEMVRDLVEKCTCPSQFPMVRVSEGKYRIGDTKVLIFVRILRSHVMVRVGGGWDTL 313
            .|||:::.|.       |.|:|.:.:.:.::||..||.|||.:...||||||.|||||||||:.|
 Worm   508 KITNEIELLK-------ETCSCCTPYQIEKISENYYRFGDTHIKRMVRILRSTVMVRVGGGWEPL 565

  Fly   314 SHYLDKHDPCRCRAQHRSSVAARLIPRQSPNHNPSNGIEL--------HKAQVIFERSPPAARRV 370
            ...|.||||||.:        .||.....|...|.:.::|        |..|:....:|....::
 Worm   566 EESLQKHDPCRTK--------GRLNINMFPEARPIHALDLMQSFTKNRHAKQMPIAGTPGPIMKI 622

  Fly   371 FNSPNCNGGPGTGSSCGTGVVGVAVPPTLQNGHSLSPNSGKYRSRSP-----TPQRKFLNQQANG 430
            ..... ...|.:|...||.            |::::..|.:...:.|     ||..|...:|:..
 Worm   623 REKTE-RSVPMSGGLGGTA------------GYTVTTESPRKTPQRPFRIPRTPSDKTPGRQSRV 674

  Fly   431 GGIASATGSSQTVTTDTSSGQLLGSPSLARRSMSPSPRRLIDMRKKQSSLDSYSSGPK 488
            |.:::...|             :..||...:|.|.:...:.| |:|:.||.....|.:
 Worm   675 GCVSNLKNS-------------IVEPSSPSQSESRASPEVAD-RQKRVSLSLKEKGKR 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pigsNP_572331.2 CH_GAS2L1_2 11..163 CDD:409117 4/22 (18%)
GAS2 257..325 CDD:460480 33/67 (49%)
D2096.11NP_001379846.1 CH_SF <117..180 CDD:469584
CH_SF <315..368 CDD:469584
GAS2 507..579 CDD:128539 37/86 (43%)
Blue background indicates that the domain is not in the aligned region.

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