DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pigs and pigs

DIOPT Version :10

Sequence 1:NP_572331.2 Gene:pigs / 31596 FlyBaseID:FBgn0029881 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_308133.6 Gene:pigs / 1269492 VectorBaseID:AGAMI1_000151 Length:923 Species:Anopheles gambiae


Alignment Length:1052 Identity:508/1052 - (48%)
Similarity:634/1052 - (60%) Gaps:210/1052 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MLEARPYRPFKSSEEYLEAMREDLAEWLSTLYPELSINADNFMDRLDTGVALCKHANYVRQAAVD 67
            :||:|||||||||||||.||||||||||:|:||:|.||.:|||||||||||||||||.||.||..
Mosquito     5 LLESRPYRPFKSSEEYLYAMREDLAEWLNTMYPDLRINVENFMDRLDTGVALCKHANNVRVAAEQ 69

  Fly    68 YLARRQARNKSMTRSMTSGLAGPILAMGNVHYLPAAKSGTFFARDNVSNFITWCRKSLKIIECLL 132
            |:|||.|||||||:|:|||||||||:|||||:|.||||||||||||||||||||||||:|:||||
Mosquito    70 YVARRMARNKSMTKSITSGLAGPILSMGNVHFLAAAKSGTFFARDNVSNFITWCRKSLQILECLL 134

  Fly   133 FETDDLIMRKNEKHVILCLLEVARRGAKFGMLAPMLVQMERQIDREIAADIKAN-GAGCSENGTQ 196
            ||||||||||||||||||||||||||||||||||||||||||||||||||.:|| |.||   |||
Mosquito   135 FETDDLIMRKNEKHVILCLLEVARRGAKFGMLAPMLVQMERQIDREIAADNRANAGVGC---GTQ 196

  Fly   197 T---DALETGNSSAATMTTITTTTVETDLYDDSDDSETEDDGDQNPVLMYGPQPQIITNDLKSLD 258
            |   |...|||.        .:|..||:|||  .|||.||...::|:|||||||||:||||||||
Mosquito   197 TEGGDGDGTGNG--------VSTGTETELYD--SDSEEEDHESESPMLMYGPQPQIVTNDLKSLD 251

  Fly   259 EMVRDLVEKCTCPSQFPMVRVSEGKYRIGDTKVLIFVRILRSHVMVRVGGGWDTLSHYLDKHDPC 323
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||
Mosquito   252 EMVRDLVEKCTCPSQFPMVRVSEGKYRIGDTKVLIFVRILRSHVMVRVGGGWDTLAHYLDKHDPC 316

  Fly   324 RCRAQHRSSVAARLIPRQSPNHNPSNGIELHKAQVIFER--SPPAARRVFNSPNCNGGP-GTGSS 385
            |||:|||||.:||||.:.:    .:||||||||||.::|  ||..|..   :|:.||.| .:|:|
Mosquito   317 RCRSQHRSSASARLITKTT----NANGIELHKAQVHYDRSGSPWKANA---TPSQNGSPINSGTS 374

  Fly   386 CGTGVVGVAVPPTLQNGHSLSPNS-GKYRSRSPTPQRKFLNQQANGGGIASATGSSQTVTTDTSS 449
                          .|.::|||.: .:.|||||:.||:.                      .|.:
Mosquito   375 --------------NNSNTLSPPARARSRSRSPSAQRRL----------------------PTEN 403

  Fly   450 GQLL---GSP-SLARRSMSPSPRRL----IDMRKKQSSLDSYSSGPKSLPGYSCSMEEANGGSGV 506
            |..|   ||| ..:|||:||||||:    :..::|.|.:.|.::|  .:..:.|..|.      |
Mosquito   404 GDKLQPPGSPLKTSRRSVSPSPRRMQENSVANKRKPSGIQSSAAG--GVVHFECDKEL------V 460

  Fly   507 GSAAGGVSSGSAGSGVAGEQGGANKFENISDNGSEISDEGYRSLGVIQSGAQKRESL-------- 563
            ....|..:       |...:...|::|::||||||||||||||||::|.|....:::        
Mosquito   461 APVVGATT-------VLPSEDDKNRYESVSDNGSEISDEGYRSLGLVQGGQTAGQTVNGAGGLRK 518

  Fly   564 ---HSQASIEDAESNARLDQTSSDSQISPSDEPAEKATTDILEEEDLNGQDREEDQEDYSVCDGP 625
               :||.|.|||::||.|:.|:||||.||:::.:...|.|    |||.     ...::.:|.:|.
Mosquito   519 GFGNSQQSSEDADTNAHLETTTSDSQASPTEDESSTKTND----EDLT-----PISDELAVANGS 574

  Fly   626 QSLPAILSGAHKLSD-------------KFEQSGVFITDDEITVDIA----------------KT 661
            ..:|..::....|.|             .||..||::.|||||||||                :|
Mosquito   575 PVVPHFVTEHDSLIDCPDGVISTGPASGSFESYGVYVNDDEITVDIANATGLRKTGFSDRILDRT 639

  Fly   662 EDQSVANTMGNPTPNLSKIPRSPLAQRRRRSIDNSTCGGAGGSLQD-LSSRSGLPAPAFSRKQPV 725
            ...:.|.|.|......|:|||||:..||:.|.:::    |.|::.| |:...||      ||..:
Mosquito   640 SVAASAATTGGAGGVGSRIPRSPVGPRRKESAEST----ASGTVTDELTVAPGL------RKPSI 694

  Fly   726 YRSVRTRNSTGATTTPVAPPRSRQATQLPMVRDVTNTWSGRTTGAPKRRPPCTADTFVAPTNGTG 790
            .:||        |..|.|...|..||.....:: |||||||:.   |:||..|:.||.|.....|
Mosquito   695 AKSV--------TRKPTALAGSTAATGESSAKE-TNTWSGRSN---KKRPSLTSQTFSAAGKAAG 747

  Fly   791 --PA-GSFERNGKGRSS---QILYDSNGRRVRSGAPGCTSSLTTSPVKN--HASSPLAQQLLEAA 847
              || |.|.||...|:|   :.......|..::....|||: .|||.|:  .|.:.|.||:.:..
Mosquito   748 GPPAPGPFTRNSPVRASLAAERTMTGRNRTPKATGSACTST-NTSPSKSSTDAVALLLQQIKDTL 811

  Fly   848 SSAKNDAQILEKMKSLLSRYAAGNQTKAGVGATATAANKINSNGKKTPVYEDFTTAWVHSNGNLE 912
            .|..||.||:|:::.|:|:.:..::                       :.:|||||||||||||:
Mosquito   812 DSGTNDTQIVERVRRLVSQTSVPDE-----------------------LVDDFTTAWVHSNGNLD 853

  Fly   913 RSE----------SCSPPAKARSKRSSAASSC-ESNNSNAGAGSGAAAGSASVVSPRR-ERGMSK 965
            ||:          |.|.|....|||:|..|:. :|..||       ....|||||||| ::|:||
Mosquito   854 RSKVMVAGVGTGASPSKPHSTLSKRASTLSNASDSTQSN-------CRDLASVVSPRRLDKGLSK 911

  Fly   966 IPAPVRHHTELY 977
            ||||||.:|.||
Mosquito   912 IPAPVRSNTGLY 923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pigsNP_572331.2 CH_GAS2L1_2 11..163 CDD:409117 131/151 (87%)
GAS2 257..325 CDD:460480 66/67 (99%)
pigsXP_308133.6 None

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