DRSC/TRiP Functional Genomics Resources

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Protein Alignment pigs and gas2l1

DIOPT Version :10

Sequence 1:NP_572331.2 Gene:pigs / 31596 FlyBaseID:FBgn0029881 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_002934334.1 Gene:gas2l1 / 100497687 XenbaseID:XB-GENE-940187 Length:718 Species:Xenopus tropicalis


Alignment Length:183 Identity:37/183 - (20%)
Similarity:65/183 - (35%) Gaps:59/183 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 HLPACKRNITMETRL----------LPKIWSPNTCMINSKRTTVHASPSENVMVILYE-NGTVWI 149
            |:..||| :..:.||          ..|::.    .::||       |...|.|:..| :|...:
 Frog   184 HVEDCKR-LAKQCRLQDLIDDLEEKCKKVYE----FVSSK-------PGTCVKVLSVEPSGNGHL 236

  Fly   150 NHRLSVKSPCNL--DLR----QFPFDT--------QTCILI--FESYSHNS----------EEVE 188
            ...|::.:.|.|  :||    :.|||:        ..|..|  :....|.|          ..:|
 Frog   237 QEDLAILADCALPAELRVGFGELPFDSTDNFSSYPDVCFQIAGYNFLCHKSFFCGRSDYFKALLE 301

  Fly   189 LHWMEE----------AVTLMKPIQLPDFDMVHYSTKKETLLYPNGYWDQLQV 231
            .|:.|.          .:||....:.....:::|....:|.|.|:..::.|.|
 Frog   302 DHFCESHELQALPSIPVITLHNITEETFMRVLYYIYSDDTELSPDNAYEVLCV 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pigsNP_572331.2 CH_GAS2L1_2 11..163 CDD:409117 17/79 (22%)
GAS2 257..325 CDD:460480
gas2l1XP_002934334.1 CH_GAS2L1_2 17..158 CDD:409117
GAS2 205..273 CDD:460480 16/78 (21%)
Blue background indicates that the domain is not in the aligned region.

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