DRSC/TRiP Functional Genomics Resources

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Protein Alignment pigs and gas2l3

DIOPT Version :10

Sequence 1:NP_572331.2 Gene:pigs / 31596 FlyBaseID:FBgn0029881 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_002936890.2 Gene:gas2l3 / 100489160 XenbaseID:XB-GENE-988977 Length:681 Species:Xenopus tropicalis


Alignment Length:832 Identity:201/832 - (24%)
Similarity:304/832 - (36%) Gaps:287/832 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EEYLEAMREDLAEWLSTLYPELSINADNFMDRLDTGVALCKHANYVRQAAVDYLARRQARNKSMT 80
            |..|..|:|||:.||:.|. .:.::.|.||:.||.|..||:..:.::..........:.|     
 Frog    44 EATLVPMQEDLSIWLTGLL-GVKVSGDKFMEELDNGFLLCQLISVIQSTMKQCCTAEELR----- 102

  Fly    81 RSMTSGLAGPILAMGNVHYLPAAKSGTFFARDNVSNFITWCRKSLKIIECLLFETDDLIMRKNEK 145
                      .:.|..|.....|.||:||||||.:||:.||| .:.:.|..|||::.|::.|:.:
 Frog   103 ----------CVPMRKVPCRRDAPSGSFFARDNTANFLRWCR-GIGVDETYLFESEGLVLHKDPR 156

  Fly   146 HVILCLLEVARRGAKFGMLAPMLVQMERQIDREIAADIKANGAGCSENGTQTDALETGNSSAATM 210
            .|.||||:|.|..:::|:..|:||::|::|:.|                 :|..:|:|       
 Frog   157 QVCLCLLDVGRIVSRYGVEPPVLVKLEKEIELE-----------------ETLIIESG------- 197

  Fly   211 TTITTTTVETDLYDDSDDSETEDDGDQNPVLMYGPQPQIITNDLKS------LDEMVRDLVE--K 267
                                                |.:.||..||      |.|.|:.:.|  .
 Frog   198 ------------------------------------PLVPTNIQKSCCHREELHEAVKHIAEDPP 226

  Fly   268 CTCPSQFPMVRVSEGKYRIGDTKVLIFVRILR-SHVMVRVGGGWDTLSHYLDKHDPCRCRAQHRS 331
            |.|..:|.:..:|||:||:||.  ::|:|:|. .|||||||||||||..:|.|:||  ||....:
 Frog   227 CNCSHRFSIEYLSEGRYRLGDK--ILFIRMLHGKHVMVRVGGGWDTLQGFLLKYDP--CRVLQFT 287

  Fly   332 SVAARLIPRQSPNHNPSNGIELHKAQVIFERSPPAARRVFNSPNCNGGPGTGSSCGTGVVGVAVP 396
            ::..:::..|....|              |..|....|....|..|  |.:..|        |..
 Frog   288 TLEQKILQFQKGGQN--------------ENMPLQPARTPQPPVMN--PLSAVS--------ASQ 328

  Fly   397 PTLQNGH---SLSPNSGKYRSRSPTPQRKFLNQQANGGGIASATGSSQTVTTDTSSGQLLGSP-- 456
            ||....|   ||: |.|...|.:.||:          .|:....   |||...       |||  
 Frog   329 PTHSKAHTPVSLA-NVGSNSSPALTPR----------SGVRPKV---QTVPRK-------GSPLF 372

  Fly   457 -----SLARRSMSPSPRRLIDMRKKQSSLDSYSSGPKSLPG-YSCSMEEANGGSGVGSAAGGVSS 515
                 .:|::|.||...|...:..|         .||::.. .:|                 |||
 Frog   373 IEPQKKVAKKSNSPPQTRASPLTSK---------APKNISATNTC-----------------VSS 411

  Fly   516 GSAGSGVAGEQGGANKFENISDNGSEISDEGYRSLGVIQSGAQKRES----LHSQASIEDAES-- 574
            ||        :.||.....:     |......|:...|:.....:.|    ||:.||..:.:|  
 Frog   412 GS--------KPGATLCNQV-----EKGKVSARATKAIEKTPVSQHSSPNLLHASASHRNLKSPK 463

  Fly   575 --------NARLDQTSSDSQISP--------SDEPAEKATTDILEEEDLNGQDREEDQEDYSVCD 623
                    ..:|.:|.:.||:..        |..||  |||                        
 Frog   464 TSPCASSCQNKLLKTIAGSQLQTKPLKETLGSHRPA--ATT------------------------ 502

  Fly   624 GPQSLPAILSGAHKLSDKFEQSG----VFITDDEITVDIAKTEDQSVANTMGNPTPNLSKIPRSP 684
               ..|....|:.......:.||    :.::.|:  |...|.|:.|..|.          :.|.|
 Frog   503 ---KAPVSAHGSANTKRAKDTSGQRPNIKMSKDD--VKTRKVEEPSKNNL----------LDRKP 552

  Fly   685 LAQRRRRSIDNSTCGGAGGSLQDLSSRSGLPAPAFSRKQPVYRSVRTRNSTGATTT---PVAPPR 746
            ..                     :|||:....|..: .|...:|:.|..:.|.|.|   |.|.|:
 Frog   553 FV---------------------VSSRANTNKPPVT-VQNATKSMPTGVAHGKTVTKSNPKAVPK 595

  Fly   747 SRQATQLPMVRDVT--NTWSGRTTGAPKRRPPCTADTFVAPTNGTGPAGSFE 796
            :.      :.:.||  ||.||||..:..|.|...|.|..||.  |.|:...:
 Frog   596 NE------IKKTVTDKNTISGRTPLSVVRVPQSAAKTHPAPR--TSPSAKIQ 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pigsNP_572331.2 CH_GAS2L1_2 11..163 CDD:409117 47/146 (32%)
GAS2 257..325 CDD:460480 34/70 (49%)
gas2l3XP_002936890.2 CH_GAS2L3 44..173 CDD:409118 47/145 (32%)
GAS2 214..283 CDD:460480 35/72 (49%)

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