DRSC/TRiP Functional Genomics Resources

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Protein Alignment pigs and plecb

DIOPT Version :10

Sequence 1:NP_572331.2 Gene:pigs / 31596 FlyBaseID:FBgn0029881 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_021322489.2 Gene:plecb / 100321011 ZFINID:ZDB-GENE-100917-2 Length:5908 Species:Danio rerio


Alignment Length:842 Identity:153/842 - (18%)
Similarity:253/842 - (30%) Gaps:301/842 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 VRVGGGWDTLSHYLDKHDPCRCRAQHRSSVAARLIPRQSPNHNPSNGIELHKAQ-VIFERSPPAA 367
            ::..|.|:  |..|......|...:.....|.|.:...|.:|      |.|.|: |..||.....
Zfish   174 IKPKGSWE--SKELPIRSDNRDYTKEMEPSARRKVAMHSFSH------ETHHAKPVEQERMVECT 230

  Fly   368 RRVFNSPNCNGGPGTGSSCGTGVVGVAVP---------------------PTLQNGHSLSPNSGK 411
            :..|........||..:.....|....||                     .|.:..|..:|:..|
Zfish   231 KTAFIQDMPKASPGVLTISSAAVESPLVPVHSEAIKEKPKVDVSRQSTSITTAKEAHHPTPSKLK 295

  Fly   412 YRSRSPTPQRKFLNQQANGGGIASATGSSQTV-----------------------TTDTSSGQLL 453
            ..........:.::...|   :|||   .:|:                       ||.|::|.|.
Zfish   296 VEKTEKALVSRKMDHVPN---VASA---EETIALESFVHAQENPKEEEFTKVTKQTTSTTTGALR 354

  Fly   454 GSPS------------------LARRSMSP-------------------SPRRLIDMRKKQSSLD 481
            .:||                  ::..|..|                   |.:..:....|.:..|
Zfish   355 ATPSKPKVDKTQETMVAKNELDVSNESSKPPVSIEAAKTKPKQDVCIKVSEKTTVVNASKMAEGD 419

  Fly   482 SY--SSGPK-----SLPGYSCSMEEANGGSGVGSAAGGVSSGSAGSGVAGEQGGANKFENISDNG 539
            ::  |||||     ::|..|.::|       :.:....|||                        
Zfish   420 AHLTSSGPKVDKSNNVPAVSAALE-------ISAFKSSVSS------------------------ 453

  Fly   540 SEISDEGYRSLGVIQSGAQKRESLHSQASIEDAESNARLDQTSSDSQISPSDEPAEKATTDILEE 604
              :|.|..:.:       .|.||..|:......:|||    .|..||:....|..:|||      
Zfish   454 --VSTEAIKEI-------PKEESCVSKEITSKGDSNA----ASHHSQLKTKGEKRQKAT------ 499

  Fly   605 EDLNGQDREEDQEDYSVCDGPQSLPAIL--SGAHKLSDKFEQSGVFITDDEITVDIAKTEDQSVA 667
                   :.:..:| |.|..|....:::  ||:..:.:|        |::|:.|   |...||..
Zfish   500 -------KTKSVQD-STCVPPAEEMSVVKPSGSEAVKEK--------TEEEVCV---KLSQQSAL 545

  Fly   668 NTMGN-----PTPNLSKIPRSPLAQRRRRSIDNSTCGGAGGSLQDLSSRSGLPAPAFSRKQPVYR 727
            ...|.     |.|.:|. |:...||:.|::          ..:|||...|.....:...::|   
Zfish   546 KGEGGIEKDAPHPTVSS-PQVEKAQKTRKN----------KKVQDLPMFSSTVQSSEKAEKP--- 596

  Fly   728 SVRTRNSTGAT---TTPVAPPRSRQATQLPMVRDVTNTWSGRTT-----GAPKRRPPCTADTFVA 784
              :...||..|   |.||. ..|:.|...|....|..|.....|     |...:.|.|:.....|
Zfish   597 --KDDESTKVTKEITLPVT-DESKMAIDAPHPTHVEKTVKTIVTKNVQDGTSLKSPVCSVPAETA 658

  Fly   785 PTNGTGPAGSFERNGK---GRSSQILYDSNGRRVRSGAP-------------------------- 820
            .          |::.|   |..||.....:..:....||                          
Zfish   659 N----------EKSNKEVCGIVSQETSSKDDNKTAFSAPSKSKVGKTATRIKNVQDKPAISSAVE 713

  Fly   821 -----GCTSSLTTSPV----------------------KNHA-SSPLAQQLLEAASSAK------ 851
                 ..|.||:|..:                      ||:| .|..:.|.:|...:.|      
Zfish   714 TTVVASSTFSLSTETIKEQYKEKVCVIASQETPFKGDKKNYAFHSATSTQKMEKMQTTKTAQTKP 778

  Fly   852 --NDAQILEKMKSLLSRYAAGNQTKAGVGATATAANKINSNGKKTPVYEDFTTAWVHSNGNLERS 914
              :.|:.:.::||.:|..|...::|..||...|.....|.:.||..::                 
Zfish   779 AVSSAEEMMEVKSSMSTEAVNEKSKREVGGIVTQETTSNGDNKKDALH----------------- 826

  Fly   915 ESCSPPAKARSKRSSAASSCESNNSNAGAGSGAAAGSASVVSPRRERGMSKIPAPVRHHTEL 976
                 ||.::||......|..:::|...:....|...::::|...|:...::...|...|.|
Zfish   827 -----PAVSKSKVVKILESKNAHDSTVVSSWMEAEVKSTLISTDAEKPKEEVCLMVSQETTL 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pigsNP_572331.2 CH_GAS2L1_2 11..163 CDD:409117
GAS2 257..325 CDD:460480 4/20 (20%)
plecbXP_021322489.2 None
Blue background indicates that the domain is not in the aligned region.

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