DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14443 and Ddx43

DIOPT Version :9

Sequence 1:NP_572330.2 Gene:CG14443 / 31595 FlyBaseID:FBgn0029880 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_003750593.1 Gene:Ddx43 / 682138 RGDID:1586947 Length:646 Species:Rattus norvegicus


Alignment Length:694 Identity:171/694 - (24%)
Similarity:309/694 - (44%) Gaps:136/694 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 RSSSESAHSSGSESSSSDSNSGSSSDSDSTTGS-----SSHGSDTGERPRMRSAVFRIHETWQSP 182
            |.|:.:|.|||..|..|.:.|..:..:.:..|:     .|.|:..|               |:.|
  Rat     4 RESAANASSSGVASRRSSTGSRGAERTATEEGNRRGRVGSRGAGGG---------------WREP 53

  Fly   183 NSFKAVKTSRENKESR--------------SRSSSLPQKRFCPSKTQNDLTYGSPEPKSPSNRGR 233
             :..|..|:...:|..              .|..|..::....:.|:..:..|:||.:.      
  Rat    54 -AGAAEATAASRREPPLCFGVKNDVVGAVIGRGGSKIREIQNTTNTRIQVIKGNPEAEI------ 111

  Fly   234 NSWRVGMRTPWKKSQSRSMSCSSIQKILVSRSFTRSRS---PHR-NTLCYQDQSKNPSRPSNYNT 294
                       |...:::|...:  |.::.....:.::   .|| :.:.:|......:..|...|
  Rat   112 -----------KIFGNKAMQTKA--KTVIDNVVKKQQNYIPGHRVDIIAFQPTVGTDTSTSESVT 163

  Fly   295 WKQPM---DEVYNNAANYRKR----------------------HNITLTSWNMRN---------- 324
            ..||:   |::..:|..:.|:                      ..:.:.:|...|          
  Rat   164 DDQPLIDWDQIREDALKWEKKKWADLPPIKKNFYIESATTSSMSQVQIDNWRKENFNITCDDLKD 228

  Fly   325 -----LPEPVLSFERSGFNA--TILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTL 382
                 :|.|:..|| ..|::  .:::.::..|:..|||||:|.|.|..:|.:::.::..||||||
  Rat   229 GEKRPIPNPICKFE-DAFHSYPEVMENIKRAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTL 292

  Fly   383 GYLLPGIMKMHNQRGLMQHKKGPIVLILVDCREAAVMVQREVLYYTNPLELRTHCLLGNSQWQGH 447
            .||:||.:.:.:|....:.:.||.:|:|...||.|:.|:.|...|:.. :|::.|:.|.....|.
  Rat   293 SYLMPGFIHLDSQPLAREQRNGPGMLVLTPTRELALQVEAECSKYSYG-DLKSVCVYGGGDRDGQ 356

  Fly   448 AE-----CDLLVASAGRL--LQMIDNKKHVVELERCTYLVLDNIDRMIDVGLEGNICRLLCRLRP 505
            .:     .|:::|:.|||  |||    .:.|.|:..||||||..|:|:|:|.|..|.::|..:||
  Rat   357 IQDVSKGVDIIIATPGRLNDLQM----NNFVNLKSVTYLVLDEADKMLDMGFEPQIMKILLDVRP 417

  Fly   506 HAQLIVSSTSWSSNLKRMANKFLGQYTAIRVGEINNIGVRLQNIRQRVEVVNGLSKVERLMKELT 570
            ..|.|::|.:|...::|:|..:|.:...:.||.::.:.|  ..::|.:.:    :..|.....:.
  Rat   418 DRQTIMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAV--STVKQNIII----TTEEEKRTHIQ 476

  Fly   571 AIYDTSDIPGKVVIYVKRQKVVEEL-VDLIRNCVPCEGIHGGRTAQENQGIIHDFGTGAYNIIVA 634
            ...:......||:::|.|:.|.:.| .|||...:..|.:||.|...:.:..:.:|.||...|::|
  Rat   477 TFLENMSPKDKVIVFVSRKAVADHLSSDLILRHISVESLHGNREQSDREKALENFKTGKVRILIA 541

  Fly   635 TQMTSNCLDVPGIRYVINYDFPDNIDKYVQRMSRTGCLSYNRNCEVISFFTMANYKLVTEVVDFL 699
            |.:.|..|||..|.:|.|||||.||::||.|:.|||  ...|....|:..|..::::.||:::.|
  Rat   542 TDLASRGLDVHDITHVYNYDFPRNIEEYVHRVGRTG--RAGRTGMSITLITRNDWRIATELINIL 604

  Fly   700 KICKQEIGPHLLQLAE-----------EKMFGPRQRRRHRPQRY 732
            :...|.|...|:.:||           ||..|   |.:.:||::
  Rat   605 ERANQNIPEELVLMAERYKANKLKREMEKKMG---RPQGKPQKF 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14443NP_572330.2 P-loop_NTPase 332..535 CDD:304359 70/211 (33%)
DEXDc 345..544 CDD:214692 69/205 (34%)
Helicase_C 560..670 CDD:278689 37/110 (34%)
Ddx43XP_003750593.1 KH-I 68..133 CDD:412160 9/83 (11%)
PTZ00110 153..642 CDD:240273 139/505 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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