DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14443 and Rs1

DIOPT Version :9

Sequence 1:NP_572330.2 Gene:CG14443 / 31595 FlyBaseID:FBgn0029880 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001286188.1 Gene:Rs1 / 44087 FlyBaseID:FBgn0021995 Length:782 Species:Drosophila melanogaster


Alignment Length:467 Identity:102/467 - (21%)
Similarity:182/467 - (38%) Gaps:102/467 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 EPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLGYLLPGIMK 391
            |.:.||.:...:..:::.:...||..||||||.|..:|..|::|...:..|||||..|:||.:.:
  Fly   154 EQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLER 218

  Fly   392 M----HNQRGLMQHKKGPIVLILVDCREAAVMV-------------------------QREVLYY 427
            :    .|.:.:.:      ||:||..||....|                         .:|.:..
  Fly   219 LLYRPLNNKAITR------VLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLR 277

  Fly   428 TNPLELRTHCLLGNSQWQGHAECDLLVASAGRLLQMIDNKKHVVELERCTYLVLDNIDRMIDVGL 492
            .||                    |:::|:.|||:..|.|..... |:....|:||..|||:|...
  Fly   278 QNP--------------------DIVIATPGRLIDHIKNTPSFT-LDSIEVLILDEADRMLDEYF 321

  Fly   493 EGNICRLL---CRLRPHAQLIVSSTSWSSNLKRMANKFLGQYTAIRVGEINNIGVRLQNIRQRVE 554
            ...:..::   |:.|   |.::.|.:.|..:|.:|...|.:  .|:|...||..|.. |:||  |
  Fly   322 AEQMKEIINSCCKTR---QTMLFSATMSEQVKDLAAVSLDK--PIKVFVNNNQQVAF-NLRQ--E 378

  Fly   555 VVNGLSKVERLMKELTAIYDTSDIPGKVVIYVKRQKVVEELVDLIRNC-VPCEGIHGGRTAQENQ 618
            .:......|...:.:.|...........:::|:.:|....|..|:... |....:||..|.|:..
  Fly   379 FIRIREDKEGDREPILASLICRTFHDHCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRL 443

  Fly   619 GIIHDFGTGAYNIIVATQMTSNCLDVPGIRYVINYDFPDNIDKYVQRMSRTG---------CLSY 674
            ..:..|.....::::||.:.:..||:.|::.|||:..|...:.|:.|:.||.         .|:.
  Fly   444 ESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAGISVSLAG 508

  Fly   675 NRNCEVISFF------TMANYKLVTEVVDFLKICKQEIGPHL-------------------LQLA 714
            .:..:::...      |:.|..:..|:::..:.....:.|.:                   |...
  Fly   509 EKERKIVKDIIKNAESTIKNRIIPPEIIEKYRNKLTSLEPEIQNILDEEQAERQLAKTEQQLSKT 573

  Fly   715 EEKMFGPRQRRR 726
            |.|:.|....||
  Fly   574 ERKLLGQTNERR 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14443NP_572330.2 P-loop_NTPase 332..535 CDD:304359 55/234 (24%)
DEXDc 345..544 CDD:214692 58/230 (25%)
Helicase_C 560..670 CDD:278689 24/110 (22%)
Rs1NP_001286188.1 PTZ00424 148..537 CDD:185609 95/417 (23%)
DEADc 159..364 CDD:238167 56/236 (24%)
Helicase_C 393..498 CDD:278689 24/104 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451704
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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