DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14443 and Rm62

DIOPT Version :9

Sequence 1:NP_572330.2 Gene:CG14443 / 31595 FlyBaseID:FBgn0029880 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster


Alignment Length:727 Identity:213/727 - (29%)
Similarity:323/727 - (44%) Gaps:112/727 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 WGS--SASDISGQSRSLKSSSSVLSSKFVTKRLFTIQHGIEGQKPNFKIRSESFSGPHSAGGFSK 99
            ||:  ..|..||.|          |.|.:|:|                 |...||...|:|.|:.
  Fly    24 WGNLLLISPRSGAS----------SEKCITQR-----------------RHFLFSSASSSGTFAS 61

  Fly   100 STRESRSKSRSMGNGKFRGKSHLRSSSESAHSSGSESSSSDSNSGSSSDSDSTTGSSSHGSDTGE 164
            |:.....:.:.....:...::.|..|:.|:..:.|:.:..||   |..|||....|.....   :
  Fly    62 SSSLCTEQRQQFHGSRRNRETILFPSTYSSLQAQSQRAFRDS---SKPDSDDYVDSIPKAE---Q 120

  Fly   165 RPRMRSAVFRIHETWQSPNSFKAVKTSRENKESRS--------------RSSSLPQKRFCPSKTQ 215
            |.|.|.::|...:........:.|....:.....|              |.......||......
  Fly   121 RTRTRKSLFNDPDERTEEIKIEGVMAPHDRDFGHSGRGGRGGDRGGDDRRGGGGGGNRFGGGGGG 185

  Fly   216 ND---LTYGSPEPKSPSNRGRNSWRVGMRTPWKKSQSRSMSCSSIQKILVSRSFTRSRSPHRNTL 277
            .|   :..|..|.:.....|.|.:..|.....::......|                        
  Fly   186 GDYHGIRNGRVEKRRDDRGGGNRFGGGGGFGDRRGGGGGGS------------------------ 226

  Fly   278 CYQDQSKNPSRPSNYNTWKQPMDEVYNNAAN--------YRKRHNITLTSWNMRNLPEPVLSFER 334
              ||....|...||...:|:...:.:.|.||        ||:...||:..    .:|.|:..|..
  Fly   227 --QDLPMRPVDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG----QVPNPIQDFSE 285

  Fly   335 SGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLGYLLPGIMKMHNQRGLM 399
            ......:::::..|||..||.||||.|.||..|.|.|.|:..|:||||||:||.|:.::||:.| 
  Fly   286 VHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPL- 349

  Fly   400 QHKKGPIVLILVDCREAAVMVQREVLYYTNPLELRTHCLLGNSQWQGHAE-----CDLLVASAGR 459
            |...|||.|:|...||.|..:|:....:.:...:|..|:.|.:...|...     |::::|:.||
  Fly   350 QRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGR 414

  Fly   460 LLQMIDNKKHVVELERCTYLVLDNIDRMIDVGLEGNICRLLCRLRPHAQLIVSSTSWSSNLKRMA 524
            |:..:....  ..|:||||||||..|||:|:|.|..|.:::.::||..|.::.|.:|...:|::|
  Fly   415 LIDFLSAGS--TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLA 477

  Fly   525 NKFLGQYTAIRVGEIN---NIGVRLQNIRQRVEVVNGLSKVERLMKELTAIYDTSDIPGKVVIYV 586
            ..|||.|..|.:|.:.   |     .||||.|:|.:..||.|:|...|:.|||||:.|||::|:|
  Fly   478 EDFLGNYIQINIGSLELSAN-----HNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFV 537

  Fly   587 KRQKVVEELVDLIRNC-VPCEGIHGGRTAQENQGIIHDFGTGAYNIIVATQMTSNCLDVPGIRYV 650
            :.::.|:.||..||:. |.|..|||.::..|...::.:|.:|..||:|||.:.:..|||.||:||
  Fly   538 ETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYV 602

  Fly   651 INYDFPDNIDKYVQRMSRTGCLSYNRNCEVISFFTMANYKLVTEVVDFLKICKQEIGPHLLQLAE 715
            ||:|:|.|.:.|:.|:.|||  ..|......:|||..|.|....:||.|:...|||.|.|..||.
  Fly   603 INFDYPQNSEDYIHRIGRTG--RSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLAR 665

  Fly   716 EKMF---GPRQR 724
            ...:   |.|.|
  Fly   666 NSRYDGGGGRSR 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14443NP_572330.2 P-loop_NTPase 332..535 CDD:304359 76/207 (37%)
DEXDc 345..544 CDD:214692 78/206 (38%)
Helicase_C 560..670 CDD:278689 48/110 (44%)
Rm62NP_524243.2 PTZ00424 280..656 CDD:185609 145/385 (38%)
DEADc 283..488 CDD:238167 76/207 (37%)
HELICc 499..633 CDD:238034 57/135 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445060
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0331
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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