DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14443 and Ddx1

DIOPT Version :9

Sequence 1:NP_572330.2 Gene:CG14443 / 31595 FlyBaseID:FBgn0029880 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_524212.2 Gene:Ddx1 / 40457 FlyBaseID:FBgn0015075 Length:727 Species:Drosophila melanogaster


Alignment Length:503 Identity:112/503 - (22%)
Similarity:190/503 - (37%) Gaps:150/503 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 NLPEPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLGYLLPG 388
            :|....:||.::|.|..:..:|.|.       :..:|:..|...||..|  ....|||.....||
  Fly   196 DLKNQEVSFTKNGQNLGVAFRLPDN-------LAKETFYPAVVLKNAEM--QFNFGKTDFKYAPG 251

  Fly   389 IMKMHN------QRGLMQHKKGPI------------------VLILVDCREAAVMVQREV----L 425
                 |      |.|....|..||                  .:|:...||.|.....::    .
  Fly   252 -----NGFVGACQAGPEHSKANPITGPAAGAPSAKPAPNAPQAIIMEPSRELAEQTYNQIEKFKY 311

  Fly   426 YYTNPLELRTHCLLGNSQ--------WQGHAECDLLVASAGRLLQMIDNKKHVVELERCTYLVLD 482
            :.:|| |:|:..|:|..:        .||   ..::|.:.|||.:||::  .:|.|..|.:.|||
  Fly   312 HLSNP-EVRSLLLIGGVRLEEQKAQLMQG---THIVVGTPGRLEEMINS--GLVLLTHCRFFVLD 370

  Fly   483 NIDRMIDVGLEGNICRLLCRLRPHAQL-------------IVSSTSWSSNLKRMANKFLGQYTAI 534
            ..|.::..|....|.||      |.|:             :.|:|..:..:|:||.:.:...|.:
  Fly   371 EADALLKQGYTELIDRL------HKQIPKITSDGRRLQMVVCSATLHAFEVKKMAERLMHFPTWV 429

  Fly   535 RV-GE------INNI--------GVRLQNIRQ---------RVEVVNG------LSKVERLMKEL 569
            .: ||      ::::        ....|::||         |..|..|      ||:..:|:|..
  Fly   430 DLKGEDAVPETVHHVVCLVDPQMDTTWQSLRQPIGTDGVHDRDNVHPGNHSKETLSQAVKLLKGE 494

  Fly   570 TAIY--DTSDIPGKVVIYVKRQKVVEELVDLIR-------NCVPCEGIHGGRTAQENQGIIHDFG 625
            ..::  |..:: .:.:|:.:.::..:.|...:|       :|| |  :||.|..||.:..:..|.
  Fly   495 YCVHAIDKHNM-DRAIIFCRTKQDCDNLERFLRQRGGKHYSCV-C--LHGDRKPQERKENLEMFK 555

  Fly   626 TGAYNIIVATQMTSNCLDVPGIRYVINYDFPDNIDKYVQRMSRTG-------------------- 670
            ......::.|.:.:..||:.|:.::||...||:...||.|:.|.|                    
  Fly   556 RQQVKFLICTDVAARGLDITGLPFMINVTLPDDKTNYVHRIGRVGRAERMGLAISLVATVPEKVW 620

  Fly   671 -----CLSYNRNC------EVISFFTMANY-KLVTEVVDFLKICKQEI 706
                 |.|..|:|      ||.......|. .|:.||.|.|.|..|::
  Fly   621 YHGEWCKSRGRSCNNTNLTEVRGCCIWYNEPNLLAEVEDHLNITIQQV 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14443NP_572330.2 P-loop_NTPase 332..535 CDD:304359 58/251 (23%)
DEXDc 345..544 CDD:214692 57/262 (22%)
Helicase_C 560..670 CDD:278689 28/118 (24%)
Ddx1NP_524212.2 P-loop_NTPase 4..>62 CDD:304359
SPRY_DDX1 91..242 CDD:293933 12/54 (22%)
SrmB 279..>612 CDD:223587 75/348 (22%)
P-loop_NTPase <280..426 CDD:304359 36/157 (23%)
Helicase_C 492..602 CDD:278689 27/113 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451757
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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