DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14443 and eIF4A

DIOPT Version :9

Sequence 1:NP_572330.2 Gene:CG14443 / 31595 FlyBaseID:FBgn0029880 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001245907.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster


Alignment Length:426 Identity:94/426 - (22%)
Similarity:185/426 - (43%) Gaps:51/426 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 NTWKQPMDEVYNNAANYRKRHNITLTSWNMRNLPEPVLSFERSGFNATILQQLEDQGYDGPTPIQ 357
            :||    .|||:|                          |:.......:|:.:...|::.|:.||
  Fly    23 STW----HEVYDN--------------------------FDDMNLREELLRGIYGYGFEKPSAIQ 57

  Fly   358 AQTWSIAKEGKNIVMISGKGTGKTLGYLLPGIMKMHNQRGLMQHKKGPIVLILVDCREAAVMVQR 422
            .:.......|::::..:..|||||..:.:..:.::.......|      .|||...||.|..:||
  Fly    58 QRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQIDTSIRECQ------ALILAPTRELATQIQR 116

  Fly   423 EVLYYTNPLELRTHCLLGNSQWQGHAE-----CDLLVASAGRLLQMIDNKKHVVELERCTYLVLD 482
            .|:.....:::.:|..:|.:..:..|.     |.::|.:.||:..||:.|  |:..:.....|||
  Fly   117 VVMALGEYMKVHSHACIGGTNVREDARILESGCHVVVGTPGRVYDMINRK--VLRTQYIKLFVLD 179

  Fly   483 NIDRMIDVGLEGNICRLLCRLRPHAQLIVSSTSWSSNLKRMANKFLGQYTAIRVGEINNIGVRLQ 547
            ..|.|:..|.:..|..:...|.|..|:|:.|.:...::..::..|:....:|.|.:..   :.|:
  Fly   180 EADEMLSRGFKDQIQDVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEE---LTLE 241

  Fly   548 NIRQRVEVVNGLSKVERLMKELTAIYDTSDIPGKVVIYVKRQKVVEELVDLIRNCVPCEGIHGGR 612
            .|:|  ..|| :.:....:..|..:|||..|...|:....|:||.:...::..:......:||..
  Fly   242 GIKQ--FYVN-VKQENWKLGTLCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDM 303

  Fly   613 TAQENQGIIHDFGTGAYNIIVATQMTSNCLDVPGIRYVINYDFPDNIDKYVQRMSRTGCLSYNRN 677
            ..::.:.|:..|.:|:..:::.|.:.:..:||..:..|||||.|.|.:.|:.|:.|.|  .:.|.
  Fly   304 EQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGG--RFGRK 366

  Fly   678 CEVISFFTMANYKLVTEVVDFLKICKQEIGPHLLQL 713
            ...|:|.|..:.:::.::..|.....:|:..::..|
  Fly   367 GVAINFITDDDRRILKDIEQFYHTTIEEMPANIADL 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14443NP_572330.2 P-loop_NTPase 332..535 CDD:304359 46/207 (22%)
DEXDc 345..544 CDD:214692 46/203 (23%)
Helicase_C 560..670 CDD:278689 27/109 (25%)
eIF4ANP_001245907.1 PTZ00424 6..403 CDD:185609 94/426 (22%)
DEADc 32..232 CDD:238167 46/207 (22%)
Helicase_C 254..358 CDD:278689 26/103 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451763
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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