DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14443 and Hlc

DIOPT Version :9

Sequence 1:NP_572330.2 Gene:CG14443 / 31595 FlyBaseID:FBgn0029880 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001285517.1 Gene:Hlc / 33118 FlyBaseID:FBgn0001565 Length:560 Species:Drosophila melanogaster


Alignment Length:473 Identity:110/473 - (23%)
Similarity:191/473 - (40%) Gaps:104/473 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 MRNLPEPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLGYLL 386
            |..:.:..:.|.....:..||:.:...|:..||.||:....:..|||::|:.:..|:|||..|.|
  Fly     1 MSQMTQKTVQFHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYAL 65

  Fly   387 PGIMKMHNQR-GLMQHKKGPIVLILVD--CREAAVMVQR------------EVLYYTNPLELRTH 436
            |.|.|:.|.: ...:.....:||....  ||::..::::            ::...:|....:.|
  Fly    66 PLIQKILNSKLNASEQYVSAVVLAPTKELCRQSRKVIEQLVESCGKVVRVADIADSSNDTVTQRH 130

  Fly   437 CLLGNSQWQGHAECDLLVASAGRLLQMIDNKKHVVELERCTYLVLDNIDRMIDVGLEGNICRLLC 501
            .|..:.        |::||:...||...: ...||:|:....||:|..|.:...|.|.:..||:.
  Fly   131 ALSESP--------DIVVATPANLLAYAE-AGSVVDLKHVETLVVDEADLVFAYGYEKDFKRLIK 186

  Fly   502 RLRPHAQLIVSSTSWSSNLKRMANKFLGQYTAIRVGEINNIGVRLQNIRQRVEVV--NGLSKVER 564
            .|.|..|.::.|.:.:.::.||....|.....:::.|              .|:|  :.||. :|
  Fly   187 HLPPIYQAVLVSATLTDDVVRMKGLCLNNPVTLKLEE--------------PELVPQDQLSH-QR 236

  Fly   565 LMKE-------LTAIYDTSDIPGKVVIYV-------KRQKVVEELVDLIRNCVPCEGIHGGRTAQ 615
            ::.|       |.|:.....|.||.:|:|       |.:..:|:..  ||.||    ::....|.
  Fly   237 ILAEENDKPAILYALLKLRLIRGKSIIFVNSIDRCYKVRLFLEQFG--IRACV----LNSELPAN 295

  Fly   616 ENQGIIHDFGTGAYNIIVAT-------------------------QMTSNCLDVPGIRYVINYDF 655
            .....|..|..|.|:||:|:                         ...|..:|...:..|||:||
  Fly   296 IRIHTISQFNKGTYDIIIASDEHHMEKPGGKSATNRKSPRSGDMESSASRGIDFQCVNNVINFDF 360

  Fly   656 PDNIDKYVQRMSRTGCLSYNRNCEVISFFTMANYKLVTEVVDFLKIC--------KQEIGPHLLQ 712
            |.::..|:.|..||.  ..|....|:||.:|...| |.:.|: .|:|        :|.|..:..:
  Fly   361 PRDVTSYIHRAGRTA--RGNNKGSVLSFVSMKESK-VNDSVE-KKLCDSFAAQEGEQIIKNYQFK 421

  Fly   713 LAEEKMFGPRQRRRHRPQ 730
            :.|.:.|      |:|.|
  Fly   422 MEEVESF------RYRAQ 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14443NP_572330.2 P-loop_NTPase 332..535 CDD:304359 52/217 (24%)
DEXDc 345..544 CDD:214692 50/213 (23%)
Helicase_C 560..670 CDD:278689 35/148 (24%)
HlcNP_001285517.1 P-loop_NTPase 11..220 CDD:304359 52/217 (24%)
DEXDc 24..231 CDD:214692 52/229 (23%)
HELICc 234..386 CDD:238034 37/160 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451754
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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