DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14443 and vas

DIOPT Version :9

Sequence 1:NP_572330.2 Gene:CG14443 / 31595 FlyBaseID:FBgn0029880 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001260458.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster


Alignment Length:727 Identity:164/727 - (22%)
Similarity:278/727 - (38%) Gaps:157/727 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GNWKDNETDAEKVQKKPFLKGTKSSIWGSSASDISGQSRSLKSSSSVLSSKFVTKRLFTIQHGIE 75
            |:|.|:|..|:....:....|...|  |.......|.:|.:               ...|..|..
  Fly    19 GDWSDDEDTAKSFSGEAEGDGVGGS--GGEGGGYQGGNRDV---------------FGRIGGGRG 66

  Fly    76 GQKPNFKIRSESFSGPHSAGGFSKSTRESRSKSRSMGNGKFRGKSHLRSSSESAHSSGSESSSSD 140
            |....::      .|....|||....||.....|. |.|.|||           ...||......
  Fly    67 GGAGGYR------GGNRDGGGFHGGRREGERDFRG-GEGGFRG-----------GQGGSRGGQGG 113

  Fly   141 SNSGSSSDSDSTTGSSSHGSDTGERPRMRSAVFRIHETWQSPNSFKAVKTSRENKESRSRSSSLP 205
            |..|.         ....|.:.|.|.|:                       .||::...|...|.
  Fly   114 SRGGQ---------GGFRGGEGGFRGRL-----------------------YENEDGDERRGRLD 146

  Fly   206 QKRFCPSKTQNDLTYGSPEPKSPSNRGR--NSWRVGMRTPWKKSQSRSMSCSSIQKILVSRSFTR 268
            :                 |.:....|||  ...|.|.|      ..|.           ...|.|
  Fly   147 R-----------------EERGGERRGRLDREERGGER------GERG-----------DGGFAR 177

  Fly   269 SR----SPHRNTLCYQDQSKN-----PSRPSNYNTWKQPMDEVYN----NAANYRKRHNITLTSW 320
            .|    ..:.|....:|..:.     |..|||      ...|:::    :..::.|.:||.:...
  Fly   178 RRRNEDDINNNNNIVEDVERKREFYIPPEPSN------DAIEIFSSGIASGIHFSKYNNIPVKVT 236

  Fly   321 NMRNLPEPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLGYL 385
            . .::|:|:..|..:.....|:..:...||..|||||..:..:...|::::..:..|:|||..:|
  Fly   237 G-SDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFL 300

  Fly   386 LPGIMKMHNQRGLMQHKKGPIVLILVDCREAAVMVQREVLYYTNPLELRTHCLLGNSQWQGHAE- 449
            ||.:.|:......::..: |.|:|:...||.|:.:..|...:.....|:...:.|.:.::...| 
  Fly   301 LPILSKLLEDPHELELGR-PQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNEC 364

  Fly   450 ----CDLLVASAGRLLQMIDNKKHVVELERCTYLVLDNIDRMIDVGLEGNICRLLCR--LRPHAQ 508
                |.:::|:.||||..:|  :..:..|...::|||..|||:|:|...::.|::..  :||..|
  Fly   365 ITRGCHVVIATPGRLLDFVD--RTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQ 427

  Fly   509 LIVSSTSWSSNLKRMANKFLGQYTAIRVGEINNIGVRLQNIRQRVEVVNGLSKVERLMKELTAIY 573
            .::.|.::...::|||.:||..|..:.:|   .:|....:::|.:..||..:|..:|::.|:...
  Fly   428 TLMFSATFPEEIQRMAGEFLKNYVFVAIG---IVGGACSDVKQTIYEVNKYAKRSKLIEILSEQA 489

  Fly   574 DTSDIPGKVVIYVKRQKVVEELVD-LIRNCVPCEGIHGGRTAQENQGIIHDFGTGAYNIIVATQM 637
            |.:      :::|:.::..:.|.. |.....|...|||.|...:.:..:.||..|:..:::||.:
  Fly   490 DGT------IVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSV 548

  Fly   638 TSNCLDVPGIRYVINYDFPDNIDKYVQRMSRTGCLSYNRNCEVISFFTMANYKLVT--------- 693
            .|..||:..|::|||||.|..||.||.|:.|||  ....|....|||.....:.:.         
  Fly   549 ASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTG--RVGNNGRATSFFDPEKDRAIAADLVKILEG 611

  Fly   694 ---EVVDFLKIC 702
               .|.|||:.|
  Fly   612 SGQTVPDFLRTC 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14443NP_572330.2 P-loop_NTPase 332..535 CDD:304359 55/209 (26%)
DEXDc 345..544 CDD:214692 54/205 (26%)
Helicase_C 560..670 CDD:278689 33/110 (30%)
vasNP_001260458.1 DEADc 247..454 CDD:238167 55/209 (26%)
DEXDc 260..467 CDD:214692 55/212 (26%)
Helicase_C 475..584 CDD:278689 35/116 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451605
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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