DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14443 and Ddx55

DIOPT Version :9

Sequence 1:NP_572330.2 Gene:CG14443 / 31595 FlyBaseID:FBgn0029880 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001258255.1 Gene:Ddx55 / 100362764 RGDID:2324094 Length:600 Species:Rattus norvegicus


Alignment Length:443 Identity:99/443 - (22%)
Similarity:184/443 - (41%) Gaps:64/443 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 NITLTSWNMRNLPEPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGT 378
            ::|..||....:|          .:..:|..|.:.|:...||:|:.|..:....|::...:..|:
  Rat     3 HVTEGSWESLQVP----------LHPLVLGALRELGFLHMTPVQSATIPLFMRNKDVAAEAVTGS 57

  Fly   379 GKTLGYLLPGI-MKMHNQRGLMQHKKGPIVLILVDCREAAVMVQREVLYYTNPLELRTHCL-LGN 441
            ||||.:::|.: :.:..:..|.:::.|.||  :...||.|:.:...:.::|......:..| :|.
  Rat    58 GKTLAFVIPILEILLRREEKLKKNQVGAIV--ITPTRELAIQIDEVLSHFTKHFPQFSQILWIGG 120

  Fly   442 -------SQWQGHAECDLLVASAGRLLQMIDNKKHVVEL----ERCTYLVLDNIDRMIDVGLEGN 495
                   .:::.|.. :::||:.|||..|...|...::|    :....||||..||::|:|.|.:
  Rat   121 RNPGEDVERFKQHGG-NIIVATPGRLEDMFRRKAEGLDLASYVKSLDVLVLDEADRLLDMGFEAS 184

  Fly   496 ICRLLCRLRPHAQLIVSSTSWSSNLKRMANKFLGQYTAIRVGEINNIGVRLQNIRQRVEVVNGLS 560
            |..:|..|....:..:.|.:.:..::.:....|.....|.|.|........|....|:|....:.
  Rat   185 INTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENHYMIC 249

  Fly   561 KVERLMKELTAIYDTSDIPGKVVIYVK------RQKVVEELVDLIRNCVPCEGIHGGRTAQENQG 619
            |.:....:|.....:......:|.:..      ..|.:|.||..::  :.|  |||....:.|: 
  Rat   250 KADEKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALVQRVK--ILC--IHGKMKYKRNK- 309

  Fly   620 IIHDFGTGAYNIIVATQMTSNCLDVPGIRYVINYDFPDNIDKYVQRMSRTGCLSYNRNCEV---- 680
            |..:|......|:|.|.:.:..:|:|.:.:|:.||.|.|...:|.|..||..:.:..:..|    
  Rat   310 IFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLP 374

  Fly   681 -----ISFFTMANYK-------LVTEVVDFLKICKQEIGPHL--LQLAEEKMF 719
                 |:|..: |.|       |....||.|        |.|  :.||:..:|
  Rat   375 MEEAYINFLAI-NQKCPLQEMSLQRNTVDLL--------PKLRAMALADRAVF 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14443NP_572330.2 P-loop_NTPase 332..535 CDD:304359 47/215 (22%)
DEXDc 345..544 CDD:214692 49/211 (23%)
Helicase_C 560..670 CDD:278689 27/115 (23%)
Ddx55NP_001258255.1 DEADc 9..224 CDD:238167 49/227 (22%)
DEXDc 24..228 CDD:214692 48/206 (23%)
Helicase_C 252..363 CDD:278689 27/115 (23%)
DUF4217 403..462 CDD:290667 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0331
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.