DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment APC7 and anapc7

DIOPT Version :9

Sequence 1:NP_572329.3 Gene:APC7 / 31594 FlyBaseID:FBgn0029879 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001107057.1 Gene:anapc7 / 558402 ZFINID:ZDB-GENE-081104-113 Length:566 Species:Danio rerio


Alignment Length:559 Identity:146/559 - (26%)
Similarity:255/559 - (45%) Gaps:37/559 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ADLLRTVLKNDRYVATLDVEYQVLLYLLNANYKERNYRAALRHFDEIIHKRRLMMR-------HK 92
            :.||.|:..|:..:.:...:||:|:|..:|.:.::.||.|...::..:.:::::.:       ..
Zfish    23 SSLLLTMSTNNPELFSPSQKYQLLVYHADAIFHDKEYRNAACKYNMALQQKKMLSKTSKVRPSST 87

  Fly    93 NAVLVAIES-SYPEFGDAEQRRRAAECYRQIGNTDMAIETLLQVPPTLRSPRINLMLARLQHHGS 156
            .:...|::: :.|  .:.|.:.:.||||..:.....||..|..:|...|:|:||:|||.|.....
Zfish    88 GSTTSAVQAQNLP--SEIEVKYKIAECYTILKLDKDAISVLDGIPSRQRTPKINMMLANLYRKAG 150

  Fly   157 RHGTTKKSEAVLAYKEVIRECPMALQVIEALLELGVNGNEINSLVMHAATVPDHFDWLSKWIKAL 221
                 ::..||.:||||:|:||:||..|..||.|.|.|.|:.|:.|.......:.||||.||||.
Zfish   151 -----QERSAVTSYKEVLRQCPLALDAIIGLLSLSVKGAEVASMTMDVIQSIPNLDWLSVWIKAH 210

  Fly   222 AQMFNFKHSDASQTFLMLHDNTTLRCNEHLMMALGKCLYYNGDYFQAEDIFSSTL------CANP 280
            |.:....:..|..|...|...:.||.|..|::.|...      ||:|.|..:|.|      ..:|
Zfish   211 AFIHGGDNQRAINTICSLEKKSLLRDNVDLLVTLADV------YFRAGDTKNSILKFEQAQMLDP 269

  Fly   281 DNVEAIGLMAVLCGQEGGCEQDSADMDYLFAKVSSEVKYTASHWFAHAQLLYDEGKFERGLNFVE 345
            ..::.:.:...|..:||..|    |::.|..::.:.....|..|.......:...::.|.|....
Zfish   270 YLIKGMDVYGYLMAREGHLE----DVEVLGGRLFNISDQHAEPWVISGCHSFYSKRYSRALYLGA 330

  Fly   346 KCLDSEPRNHEALILRGRLLIALERHTQAVCAFRTAQMVAPYRFEIYRGLFHSYLAQKRFKEANA 410
            |.:.....:.:||:|:|..|..:.|..:|:..||.|..:||.|.:.|.||...|||....:||..
Zfish   331 KAIQLNSNSVQALLLKGVALRNMGRVQEAIIHFREAMRLAPCRLDCYEGLIDCYLASNGIREAMG 395

  Fly   411 LCNWTIRLFQNSPRSFTMFGRTLFLFPDPRMRRTARKFAEKSLKINHIYTPAVNLIADICQVEGP 475
            :.|...:....:.::.|:.. |:.| .||..:..|:...:|:|.....|..||...|::...|..
Zfish   396 MANNIYKTLGANAQTLTILA-TVCL-EDPMTQEKAKTLLDKALAQRPDYIKAVVKKAELLSREQK 458

  Fly   476 TKAIIKLLEKHVIIFPKVNLLNHLGDIMRKQKEPVKAMEYYYKALRQDPKSKRTLRGLRLLAKSD 540
            .:..|.||...:.......|...|||.:....:..:||:.|..||..||..:::|.|::.:.|.:
Zfish   459 YEEGIALLRNTLANQSDCVLHRMLGDFLVAVNDYQEAMDQYSIALSLDPNDQKSLEGMQKMEKEE 523

  Fly   541 DESPVLDESDDIGMDNQQSINDLTTLCEATNAQGAEGAE 579
            ..:....|.|...|:......||    |.::::.|:.|:
Zfish   524 SPTDATVELDGDDMEGSGEEGDL----EGSDSEAAQWAD 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APC7NP_572329.3 TPR repeat 251..277 CDD:276809 8/31 (26%)
TPR_11 321..386 CDD:290150 15/64 (23%)
TPR repeat 321..349 CDD:276809 5/27 (19%)
TPR repeat 354..384 CDD:276809 10/29 (34%)
TPR_11 356..418 CDD:290150 22/61 (36%)
TPR repeat 459..489 CDD:276809 8/29 (28%)
TPR repeat 493..521 CDD:276809 8/27 (30%)
anapc7NP_001107057.1 TPR 228..503 CDD:223533 69/286 (24%)
TPR repeat 238..266 CDD:276809 8/33 (24%)
TPR repeat 339..369 CDD:276809 10/29 (34%)
TPR 340..371 CDD:197478 10/30 (33%)
TPR repeat 442..471 CDD:276809 8/28 (29%)
TPR repeat 476..504 CDD:276809 8/27 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580823
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1174
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10512
Inparanoid 1 1.050 176 1.000 Inparanoid score I4049
OMA 1 1.010 - - QHG54369
OrthoDB 1 1.010 - - D349830at33208
OrthoFinder 1 1.000 - - FOG0007448
OrthoInspector 1 1.000 - - oto41341
orthoMCL 1 0.900 - - OOG6_105339
Panther 1 1.100 - - LDO PTHR12558
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5218
SonicParanoid 1 1.000 - - X6323
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

Return to query results.
Submit another query.