DRSC/TRiP Functional Genomics Resources

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Protein Alignment APC7 and anapc7

DIOPT Version :9

Sequence 1:NP_572329.3 Gene:APC7 / 31594 FlyBaseID:FBgn0029879 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001016327.1 Gene:anapc7 / 549081 XenbaseID:XB-GENE-945412 Length:565 Species:Xenopus tropicalis


Alignment Length:552 Identity:142/552 - (25%)
Similarity:246/552 - (44%) Gaps:24/552 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ADLLRTVLKNDRYVATLDVEYQVLLYLLNANYKERNYRAALRHFDEIIHKRRLMMRHK------- 92
            :.||.|:..|:..:.:...:||:|:|..::.:.::.||.|:..:...:.:::.:.:..       
 Frog    23 SSLLLTMSNNNPEMFSPSQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALTKTSKVRPATG 87

  Fly    93 NAVLVAIESSYPEFGDAEQRRRAAECYRQIGNTDMAIETLLQVPPTLRSPRINLMLARLQHHGSR 157
            ||.........|  .:.|.:.:.|:||..:.....||..|..:|...|:|:||:|||.|..... 
 Frog    88 NAASTPQNQCLP--SEIEVKYKMADCYTMLKQDKDAIAILDGIPSRQRTPKINMMLANLYKKAG- 149

  Fly   158 HGTTKKSEAVLAYKEVIRECPMALQVIEALLELGVNGNEINSLVMHAATVPDHFDWLSKWIKALA 222
                ::..||.:||||:|:||:||..|..||.|.|.|.|:.|:.::......:.||||.||||.|
 Frog   150 ----QERSAVTSYKEVLRQCPLALDAILGLLSLSVKGAEVASMTLNVIQSIPNLDWLSAWIKAYA 210

  Fly   223 QMFNFKHSDASQTFLMLHDNTTLRCNEHLMMALGKCLYYNGDYFQAEDIFSSTLCANPDNVEAIG 287
            .:....::.|..|...|...:.||.|..|:..|....:..||...|...|......:|..::.:.
 Frog   211 FVHTGDNTRAINTICSLEKKSLLRDNVDLLGTLADLYFRVGDNKNAILKFEQAQMLDPYLIKGMD 275

  Fly   288 LMAVLCGQEGGCEQDSADMDYLFAKVSSEVKYTASHWFAHAQLLYDEGKFERGLNFVEKCLDSEP 352
            :...|..:||..|    |::.|..::.:.....|..|.......:...:..|.|....|.:....
 Frog   276 IYGYLLAREGRLE----DVENLGCRLFNISDQHAEPWVVSGCHSFYTKRHSRALYLGAKAIQLNS 336

  Fly   353 RNHEALILRGRLLIALERHTQAVCAFRTAQMVAPYRFEIYRGLFHSYLAQKRFKEANALCNWTIR 417
            .:.:||:|:|..|..:.|..:|:..||.|..:||.|.:...||...|||....:||..:.|...:
 Frog   337 NSVQALLLKGAALRNMGRVQEAIIHFREAIRLAPCRLDCCEGLIECYLASSSVREAMVMANNVYK 401

  Fly   418 LFQNSPRSFTMFGRTLFLFPDPRMRRTARKFAEKSLKINHIYTPAVNLIADICQVEGPTKAIIKL 482
            ....:.::.|:.. |:.| .||..:..|:...:|:|.....|..||...|::...|...:..|.|
 Frog   402 TLGANAQTLTLLA-TVCL-EDPVTQEKAKTLLDKALIQRPDYIKAVVKKAELLSREQKYEEGIAL 464

  Fly   483 LEKHVIIFPKVNLLNHLGDIMRKQKEPVKAMEYYYKALRQDPKSKRTLRGLRLLAKSDDESPVLD 547
            |...:.......|...|||.:....|..:||:.|..||..||..:::|.|::.:.|.:..:....
 Frog   465 LRNTLANQSDCVLHRMLGDFLVAVNEFQEAMDQYSIALSLDPNDQKSLEGMQKMEKEESPTDATQ 529

  Fly   548 ESDDIGMDNQQSINDLTTLCEATNAQGAEGAE 579
            |.|...|:......||    |.::::.|:.|:
 Frog   530 EEDVDDMEGSGEEGDL----EGSDSEAAQWAD 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APC7NP_572329.3 TPR repeat 251..277 CDD:276809 6/25 (24%)
TPR_11 321..386 CDD:290150 15/64 (23%)
TPR repeat 321..349 CDD:276809 5/27 (19%)
TPR repeat 354..384 CDD:276809 10/29 (34%)
TPR_11 356..418 CDD:290150 21/61 (34%)
TPR repeat 459..489 CDD:276809 8/29 (28%)
TPR repeat 493..521 CDD:276809 9/27 (33%)
anapc7NP_001016327.1 TPR repeat 43..71 CDD:276809 7/27 (26%)
TPR repeat 101..130 CDD:276809 7/28 (25%)
TPR repeat 135..163 CDD:276809 13/32 (41%)
PEP_TPR_lipo <208..509 CDD:274350 75/306 (25%)
TPR repeat 338..368 CDD:276809 10/29 (34%)
TPR repeat 442..466 CDD:276809 6/23 (26%)
TPR repeat 475..503 CDD:276809 9/27 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11127
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10512
Inparanoid 1 1.050 174 1.000 Inparanoid score I3961
OMA 1 1.010 - - QHG54369
OrthoDB 1 1.010 - - D349830at33208
OrthoFinder 1 1.000 - - FOG0007448
OrthoInspector 1 1.000 - - oto103115
Panther 1 1.100 - - LDO PTHR12558
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5218
SonicParanoid 1 1.000 - - X6323
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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