DRSC/TRiP Functional Genomics Resources

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Protein Alignment APC7 and Cdc23

DIOPT Version :10

Sequence 1:NP_572329.3 Gene:APC7 / 31594 FlyBaseID:FBgn0029879 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_610036.2 Gene:Cdc23 / 35315 FlyBaseID:FBgn0032863 Length:678 Species:Drosophila melanogaster


Alignment Length:306 Identity:60/306 - (19%)
Similarity:86/306 - (28%) Gaps:129/306 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 ENGTVWINHRLSVKSPCNLDLRQFPFDTQTCILIFESYSHNSEEVELHWMEEAVTLMKPIQLPDF 207
            |||:..:.|.:|                       |:.|.|.|.     ..::||...|      
  Fly    31 ENGSALLKHHVS-----------------------EASSSNVER-----FLDSVTPSVP------ 61

  Fly   208 DMVHYSTKKETLLYPNGYWDQLQVTFTFKRRYGFYIIQAYVPTYLTIIVSWVSFCMEPKALPART 272
              .||.:|                  |..|..|...:::.||.:|...| |.||.       ..:
  Fly    62 --AHYLSK------------------TIVRERGGSDVESQVPYFLLGDV-WESFA-------EWS 98

  Fly   273 TVGISSLLALTFQFGNILKNLPRV--SYVKAMDVWMLGCISFVFGTMVELAFVCYISRCQNSVRN 335
            ..||...|.|.       .|..||  .||.::.           |..| .|.|..::....:.|.
  Fly    99 AYGIGVPLTLN-------NNKDRVFQYYVPSLS-----------GIQV-YADVDALTSSLQARRQ 144

  Fly   336 AERRRERMRNSQVWANGSCRTRSNGYANGGSVIS-----------HYHPTSNGNGNNNRHDTPQV 389
            .|......|:|.  :.||......|.......||           |...:|:.:|          
  Fly   145 GEESESDFRDSS--SEGSSSESERGLCYSKEQISARMDKLSLRKEHQEDSSSDDG---------- 197

  Fly   390 TGRGSLHRNGPPSPLNLQMTTFDSEIPLTFDQLPVSMESDRPLIEE 435
                        .||:       |:..|.|:.|    |.|.|.:.|
  Fly   198 ------------EPLS-------SQGRLIFEYL----ERDLPYVRE 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APC7NP_572329.3 CpoB 34..135 CDD:441335
LapB 108..411 CDD:442196 52/280 (19%)
TPR repeat 251..277 CDD:276809 6/25 (24%)
LapB 254..523 CDD:442196 39/195 (20%)
TPR repeat 321..349 CDD:276809 6/27 (22%)
TPR repeat 354..384 CDD:276809 6/40 (15%)
TPR repeat 459..489 CDD:276809
TPR repeat 493..521 CDD:276809
Cdc23NP_610036.2 ANAPC8 13..119 CDD:427675 32/156 (21%)
LapB 255..521 CDD:442196
TPR repeat 255..278 CDD:276809
TPR repeat 318..346 CDD:276809
TPR repeat 351..381 CDD:276809
TPR repeat 386..414 CDD:276809
TPR repeat 420..448 CDD:276809
TPR repeat 454..477 CDD:276809
TPR repeat 494..522 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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