DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pat1 and AT2G31240

DIOPT Version :10

Sequence 1:NP_572328.1 Gene:Pat1 / 31593 FlyBaseID:FBgn0029878 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_850163.1 Gene:AT2G31240 / 817681 AraportID:AT2G31240 Length:617 Species:Arabidopsis thaliana


Alignment Length:581 Identity:116/581 - (19%)
Similarity:191/581 - (32%) Gaps:203/581 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 LAKRLSENYVSRYEVVAGHEEEELESSMDTVEDRSTEFSSLYTYDSESTNADSISDFND-EFSAD 171
            |.||  :.:|:.|..:..|.||..|.|....|....|    ..::|.:|..:.:..|.: |.|.:
plant    55 LIKR--QFWVNPYRNLNTHVEEPPEISSSDKEKIDLE----EAFESANTTDEMVRLFKEMELSFE 113

  Fly   172 IGSIVGLPHRRATQEELDAINDSGLEELSAVELQVIDLGLRLGSFLSEAGWMQESITVLACLNVR 236
             |:.:||.                              .|:||..|...|...|.:         
plant   114 -GNELGLS------------------------------ALKLGLHLDREGEDPEKV--------- 138

  Fly   237 LKDLPTHKHWLQFRLDCLQRLLYAESAHCNFK-EAEKTYAELMGLNKWLNKSVPNQLVAITYSQI 300
                                |.||:.|..:|. :..|                ||.|||:....:
plant   139 --------------------LSYADKALKSFDGDGNK----------------PNLLVAMASQLM 167

  Fly   301 SAMYFARNEYKNSHLWSGLAMRFLKGYANPRTIIDVLRQAAKACVVK--RDFARANLLICQAVRR 363
            .:..:....:.:|           .||.|....|.|..:|...|||:  |....|..|....|:.
plant   168 GSANYGLKRFSDS-----------LGYLNRANRILVKLEADGDCVVEDVRPVLHAVQLELANVKN 221

  Fly   364 A---REYFGPTHQKYGDALLDYGFFLLNVDSVFQSVNIYKEALAVRRGIFGNMNFHVAIAHEDLS 425
            |   ||                           :::...|::|.::...|...:..:.:|:..|:
plant   222 AMGRRE---------------------------EAIENLKKSLEIKEMTFDEDSKEMGVANRSLA 259

  Fly   426 YAYY-----------------VHEYSTGDFSC--AQD-------------HVDKAV--NIMQHLV 456
            .||.                 :|:...|:.|.  |||             | |||:  |.:...|
plant   260 DAYVAVLNFNEALPYALKALEIHKKELGNNSAEVAQDRRLLGVIYSGLEQH-DKALEQNRLSQRV 323

  Fly   457 PSN---HLMLASAKRVKALLLEEIALDKMADGIDEEDLLLQSEE----------LHNFALLLSLQ 508
            ..|   .|.|..|:...|.:  ::||.|..:.||....::|..:          :.....|::.|
plant   324 LKNWGMKLELIRAEIDAANM--KVALGKYEEAIDILKSVVQQTDKDSEMRAMVFISMSKALVNQQ 386

  Fly   509 VFGE------------------VNVQTAKHYGNLGRLYQTMNRFEEAERMHKKAIKIKSEL--LG 553
            .|.|                  :.|:.|:.|..:...|::||.||.|..:.:|.:.|..:|  ..
plant   387 KFAESKRCLEFACEILEKKETALPVEVAEAYSEVAMQYESMNEFETAISLLQKTLGILEKLPQEQ 451

  Fly   554 HFDYEVGLSIGHLASLYNYQMKKYRDAEQLYMRSIDISLR-LFGNSYSGLEYDYLGLCHVY 613
            |.:..|...||.|. |::.::.:    ...|:.|....|: .||..:.|:.|.|..|...|
plant   452 HSEGSVSARIGWLL-LFSGRVSQ----AVPYLESAAERLKESFGAKHFGVGYVYNNLGAAY 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pat1NP_572328.1 Spy 471..>628 CDD:443119 39/174 (22%)
TPR_12 516..590 CDD:315987 19/75 (25%)
TPR repeat 518..546 CDD:276809 9/27 (33%)
TPR repeat 559..590 CDD:276809 7/30 (23%)
TPR repeat 603..628 CDD:276809 4/11 (36%)
AT2G31240NP_850163.1 LapB <210..441 CDD:442196 50/260 (19%)
TPR_12 211..284 CDD:315987 14/99 (14%)
TPR repeat 214..238 CDD:276809 6/50 (12%)
TPR repeat 251..281 CDD:276809 4/29 (14%)
TPR repeat 367..401 CDD:276809 4/33 (12%)
TPR 412..>595 CDD:440225 27/101 (27%)
TPR repeat 414..442 CDD:276809 9/27 (33%)
TPR repeat 460..483 CDD:276809 6/27 (22%)
TPR repeat 488..531 CDD:276809 7/20 (35%)
TPR repeat 536..566 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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