DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pat1 and TTC19

DIOPT Version :9

Sequence 1:NP_001259286.1 Gene:Pat1 / 31593 FlyBaseID:FBgn0029878 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_060245.3 Gene:TTC19 / 54902 HGNCID:26006 Length:380 Species:Homo sapiens


Alignment Length:307 Identity:57/307 - (18%)
Similarity:131/307 - (42%) Gaps:51/307 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   333 IIDVLRQAAKACVVKRDFARANLLICQAVRRAREYFGPTHQKYG-----DALLDYGFF---LLNV 389
            ||.:|:: ||..::|.:...|.|::..|:|.|.:    |..|..     |.:.:..|.   |.|.
Human    96 IIQLLKR-AKLSIMKDEPEEAELILHDALRLAYQ----TDNKKAITYTYDLMANLAFIRGQLENA 155

  Fly   390 DSVFQSVNIYKEALAVRRGIFGNMNFHVAIAHEDLSYAYYVHEYSTGDF----SCAQDHVDKAVN 450
            :.:|::...|.....:::.  .|....:::....:..|....|::...:    |..::.:::...
Human   156 EQLFKATMSYLLGGGMKQE--DNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTLEEKIEREKE 218

  Fly   451 IMQHLV-----PSNHLMLASAKRVKALLLEEIALDKMADGIDEEDLLLQSEELHNFALLLSLQVF 510
            :.:.::     .:.||:|.            :.||..|..:.......|::.::..||.:|.::.
Human   219 LAEDIMSVEEKANTHLLLG------------MCLDACARYLLFSKQPSQAQRMYEKALQISEEIQ 271

  Fly   511 GEVNVQTAKHYGNLGRLYQTMNRFEEAERMHKKAIKIKSELLGHFDY-EVGLSIGHLASLYNYQM 574
            ||.:.||.....:|........||:||....::|    |:|....:: |:.:.:.:||::..:: 
Human   272 GERHPQTIVLMSDLATTLDAQGRFDEAYIYMQRA----SDLARQINHPELHMVLSNLAAVLMHR- 331

  Fly   575 KKYRDAEQLYMRSIDISLRLFGNSYSGLEYDYLGLCHVYETLHNFEK 621
            ::|..|:::|..::         ..:.|:.|.:.:.|:.|.|....|
Human   332 ERYTQAKEIYQEAL---------KQAKLKKDEISVQHIREELAELSK 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pat1NP_001259286.1 DnaQ_like_exo <53..110 CDD:299142
TPR_12 478..547 CDD:290160 17/68 (25%)
TPR_12 516..590 CDD:290160 16/74 (22%)
TPR_10 517..553 CDD:290111 9/35 (26%)
TPR repeat 518..546 CDD:276809 6/27 (22%)
TPR repeat 559..590 CDD:276809 5/30 (17%)
TPR repeat 603..628 CDD:276809 5/19 (26%)
TTC19NP_060245.3 TPR 1 136..169 6/32 (19%)
TPR 2 179..212 3/32 (9%)
TPR_12 233..311 CDD:290160 22/93 (24%)
TPR 3 237..270 7/44 (16%)
TPR_12 275..349 CDD:290160 16/87 (18%)
TPR repeat 278..308 CDD:276809 8/33 (24%)
TPR 4 279..312 8/36 (22%)
TPR 5 318..351 5/42 (12%)
TPR repeat 318..346 CDD:276809 5/37 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1840
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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