DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pat1 and Klc2

DIOPT Version :10

Sequence 1:NP_572328.1 Gene:Pat1 / 31593 FlyBaseID:FBgn0029878 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001356290.1 Gene:Klc2 / 16594 MGIID:107953 Length:636 Species:Mus musculus


Alignment Length:433 Identity:105/433 - (24%)
Similarity:168/433 - (38%) Gaps:99/433 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 QEELDAINDSGLEELSAVELQVI-DLGLRLGSFLSEAGWMQESITVLACLNVRLKDLPTHKHWLQ 248
            :..|:||      ||...|.||| .|...||:..||   .|:       |..:::.|.....||:
Mouse    62 RRSLEAI------ELGLGEAQVILALSSHLGAVESE---KQK-------LRAQVRRLVQENQWLR 110

  Fly   249 FRL-DCLQRLLYAESAHCNFKEAEKTYAELMGLNKWLNKSVPNQLVA-ITYSQISAMYFARNEYK 311
            ..| ...|:|..:|.|....:|.::....:..:.|....:.||:... :....:..::  .||.:
Mouse   111 EELAGTQQKLQRSEQAVAQLEEEKQHLLFMSQIRKLDEDASPNEEKGDVPKDSLDDLF--PNEDE 173

  Fly   312 NSHLWS---GLAMRFLKGYANP---RTIIDVLRQAAKACVVKRDFARANLLICQAVRRAREYFGP 370
            .|...|   |.......||..|   ||:.:::.|.|.    :..:..|..|..||:....:..|.
Mouse   174 QSPAPSPGGGDVAAQHGGYEIPARLRTLHNLVIQYAS----QGRYEVAVPLCKQALEDLEKTSGH 234

  Fly   371 THQKYGDALLDYGFFLLNVDS-VFQSVNIYKEALAVRRGIFGNMNFHVAIAHEDLSYAYYVHEYS 434
            .|.....        :||:.: |::..|.||:|                 ||. |:.|..:.|.:
Mouse   235 DHPDVAT--------MLNILALVYRDQNKYKDA-----------------AHL-LNDALAIREKT 273

  Fly   435 TGDFSCAQDHVDKAVNIMQHLVPSNHLMLASAKRVKALLLEEIALDKMADGIDEEDLLLQSEELH 499
            .|     :||...|..:       |:|.:...||.|                     ..::|.|.
Mouse   274 LG-----KDHPAVAATL-------NNLAVLYGKRGK---------------------YKEAEPLC 305

  Fly   500 NFALLLSLQVFGEVNVQTAKHYGNLGRLYQTMNRFEEAERMHKKAIKIKSELLGHFDYEVGLSIG 564
            ..||.:..:|.|:.:...||...||..|.|...:.||.|..:::|::|.:..||..|..|..:..
Mouse   306 KRALEIREKVLGKFHPDVAKQLSNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKN 370

  Fly   565 HLASLYNYQMKKYRDAEQLYMRSIDISLRL----FGNSYSGLE 603
            :|||.| .:..||:|||.||.   :|..|.    ||:..:.||
Mouse   371 NLASCY-LKQGKYQDAETLYK---EILTRAHEKEFGSVNARLE 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pat1NP_572328.1 Spy 471..>628 CDD:443119 38/137 (28%)
TPR_12 516..590 CDD:315987 26/73 (36%)
TPR repeat 518..546 CDD:276809 10/27 (37%)
TPR repeat 559..590 CDD:276809 12/30 (40%)
TPR repeat 603..628 CDD:276809 1/1 (100%)
Klc2NP_001356290.1 Crescentin 26..>132 CDD:437057 24/85 (28%)
TPR 195..437 CDD:440225 70/282 (25%)
TPR repeat 199..226 CDD:276809 8/30 (27%)
TPR repeat 240..268 CDD:276809 11/53 (21%)
TPR repeat 282..310 CDD:276809 9/55 (16%)
TPR repeat 323..353 CDD:276809 10/29 (34%)
TPR repeat 366..393 CDD:276809 11/30 (37%)

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